BO18620.complete Sequence
256 bp assembled on 2009-05-13
GenBank Submission: KX797365
> BO18620.complete
GAAGTTATCAGTCGACATGAGCAAGGACATTTACTACTCCGACAAGTACT
ACGATGAGCAGTTCGAGTACAGACATGTGGTTTTGCCAAAAGAGCTGGTA
AAAATGGTGCCCAAGACTCATCTGATGACGGAGGCCGAGTGGCGATCAAT
TGGCGTACAGCAGTCGCGCGGATGGATCCACTACATGATCCATAAGCCGG
AGCCCCACATCCTCCTGTTTCGGCGACCCAAAACGGATGCAAGCTTTCTA
GACCAT
BO18620.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:55:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cks30A-RA | 225 | CG3738-PA | 1..222 | 17..238 | 1110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:55:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cks30A-RA | 1147 | CG3738-RA | 293..514 | 17..238 | 1110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:55:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9331179..9331348 | 69..238 | 850 | 100 | Plus |
2L | 23513712 | 2L | 9331055..9331110 | 17..72 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:55:10 has no hits.
BO18620.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:02 Download gff for
BO18620.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cks30A-RA | 289..510 | 17..240 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:36 Download gff for
BO18620.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cks30A-RA | 293..514 | 17..240 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:29:45 Download gff for
BO18620.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cks30A-RA | 293..514 | 17..240 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:29:45 Download gff for
BO18620.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9331183..9331348 | 73..240 | 98 | | Plus |
2L | 9331055..9331110 | 17..72 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:36 Download gff for
BO18620.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9331055..9331110 | 17..72 | 100 | -> | Plus |
arm_2L | 9331183..9331348 | 73..240 | 98 | | Plus |
BO18620.pep Sequence
Translation from 16 to 256
> BO18620.pep
MSKDIYYSDKYYDEQFEYRHVVLPKELVKMVPKTHLMTEAEWRSIGVQQS
RGWIHYMIHKPEPHILLFRRPKTDASFLDH
BO18620.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:53:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cks30A-PA | 74 | CG3738-PA | 1..74 | 1..74 | 407 | 100 | Plus |
Cks85A-PC | 96 | CG9790-PC | 6..76 | 5..75 | 290 | 66.2 | Plus |
Cks85A-PB | 96 | CG9790-PB | 6..76 | 5..75 | 290 | 66.2 | Plus |
Cks85A-PA | 96 | CG9790-PA | 6..76 | 5..75 | 290 | 66.2 | Plus |