BO18622.complete Sequence
1192 bp assembled on 2009-05-13
GenBank Submission: KX797438
> BO18622.complete
GAAGTTATCAGTCGACATGTCAGCATTTGAACTGAAAAATTTAAATGATT
GCTTGGAAAAGCATTTACCACCCGATGAACTAAAGGAGGTTAAGAGAATT
TTGTACGGCGTAGAAGAAGATCAAACGCTTGAGCTGCCCACAAGTGCGAA
AGATATTGCCGAACAGAATGGATTCGACATCAAGGGCTATCGCTTCACGG
CGCGAGAGGAGCAAACTCGCAAGCGCCGGATAGTCAGAGTTGGCGCCATC
CAAAACTCTATCGTAATCCCTACTACGGCGCCCATTGAAAAACAACGAGA
GGCCATCTGGAACAAAGTGAAGACTATGATCAAGGCGGCAGCGGAAGCCG
GATGCAACATTGTTTGCACCCAAGAAGCGTGGACCATGCCCTTTGCCTTC
TGCACTCGCGAGAAGTTTCCTTGGTGTGAGTTTGCCGAAGAAGCCGAAAA
CGGTCCCACAACCAAGATGCTCGCAGAGCTGGCCAAGGCTTACAACATGG
TTATCATCCACTCGATTCTGGAGCGAGATATGGAGCATGGCGAGACCATT
TGGAATACGGCAGTGGTCATCTCGAACAGTGGTCGCTACCTGGGCAAGCA
CCGCAAGAACCACATTCCCCGGGTGGGTGACTTCAATGAGTCCACCTACT
ACATGGAGGGGAACACCGGTCATCCGGTTTTCGAGACGGAGTTCGGCAAG
CTGGCTGTGAACATATGCTACGGGCGCCATCACCCACAGAACTGGATGAT
GTTCGGTCTGAATGGAGCCGAGATTGTCTTTAATCCCTCGGCTACGATCG
GCCGCCTATCGGAGCCATTGTGGAGCATTGAGGCACGTAACGCTGCCATC
GCCAATAGCTACTTTACGGTTCCGATTAATCGCGTGGGAACCGAGCAGTT
CCCGAACGAATACACATCTGGTGATGGCAACAAGGCGCATAAGGAGTTTG
GTCCCTTCTACGGATCTTCTTATGTCGCAGCTCCTGACGGCTCAAGGACA
CCGAGCTTATCGCGGGACAAAGACGGCTTGCTTGTCGTTGAACTCGATCT
GAACCTGTGTCGCCAGGTGAAGGACTTCTGGGGCTTCCGCATGACGCAGA
GAGTTCCGCTGTATGCGGAGTCCTTCAAAAAGGCATCCGAACATGGCTTC
AAGCCGCAGATCATCAAGGAAACAGCAAGCTTTCTAGACCAT
BO18622.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:00:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pyd3-RA | 1161 | CG3027-PA | 1..1158 | 17..1174 | 5790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:00:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pyd3-RA | 1361 | CG3027-RA | 94..1251 | 17..1174 | 5790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 02:00:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7748254..7748873 | 1003..384 | 3100 | 100 | Minus |
| 3R | 32079331 | 3R | 7748950..7749212 | 383..121 | 1315 | 100 | Minus |
| 3R | 32079331 | 3R | 7748023..7748194 | 1174..1003 | 860 | 100 | Minus |
| 3R | 32079331 | 3R | 7749883..7749986 | 120..17 | 520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 02:00:22 has no hits.
BO18622.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:11 Download gff for
BO18622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pyd3-RA | 91..1248 | 17..1176 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:07:07 Download gff for
BO18622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pyd3-RA | 94..1251 | 17..1176 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:35:52 Download gff for
BO18622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pyd3-RA | 94..1251 | 17..1176 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:35:52 Download gff for
BO18622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7748021..7748193 | 1004..1176 | 98 | <- | Minus |
| 3R | 7748254..7748873 | 384..1003 | 100 | <- | Minus |
| 3R | 7748950..7749212 | 121..383 | 100 | <- | Minus |
| 3R | 7749883..7749986 | 17..120 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:07:07 Download gff for
BO18622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3573743..3573915 | 1004..1176 | 98 | <- | Minus |
| arm_3R | 3573976..3574595 | 384..1003 | 100 | <- | Minus |
| arm_3R | 3574672..3574934 | 121..383 | 100 | <- | Minus |
| arm_3R | 3575605..3575708 | 17..120 | 100 | | Minus |
BO18622.pep Sequence
Translation from 16 to 1192
> BO18622.pep
MSAFELKNLNDCLEKHLPPDELKEVKRILYGVEEDQTLELPTSAKDIAEQ
NGFDIKGYRFTAREEQTRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNK
VKTMIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENGPTTK
MLAELAKAYNMVIIHSILERDMEHGETIWNTAVVISNSGRYLGKHRKNHI
PRVGDFNESTYYMEGNTGHPVFETEFGKLAVNICYGRHHPQNWMMFGLNG
AEIVFNPSATIGRLSEPLWSIEARNAAIANSYFTVPINRVGTEQFPNEYT
SGDGNKAHKEFGPFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDLNLCRQ
VKDFWGFRMTQRVPLYAESFKKASEHGFKPQIIKETASFLDH
BO18622.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:53:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pyd3-PA | 386 | CG3027-PA | 1..386 | 1..386 | 2057 | 100 | Plus |
