Clone BO18626 Report

Search the DGRC for BO18626

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:186
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG10013-RA
Protein status:BO18626.pep: Imported from assembly
Sequenced Size:1429

Clone Sequence Records

BO18626.complete Sequence

1429 bp assembled on 2009-05-13

GenBank Submission: KX799540

> BO18626.complete
GAAGTTATCAGTCGACATGTCGTTAGACCAAGTTATAATCAACTGCATGC
GCAGCAAGAACTGGATCAATGTCCTGCTCCTTAGATCGATGGATCTTTTC
CAACCCCTACTGGTCGAGAGTTCCAATGTGTCCCAATTGATAGAGGTCAG
CCCCAATGGGATCAGTTGGCACGAGAAGAACGTGGAGTACCGCATCATAA
TGGACGAGTTCTTCGATATAATCACCAGGACGAATGCTGGCGACGTGCCC
ATTACCTTAGTCGAAATGAAGGGTAGTCATGTGTCATTTGGATTATATCT
CCGTAGGATTAGGTACAGCATTTTGGATGCGCTCACCATTAATGTGGAAC
TGGGGGAGCTGCCAATGTGTATTTCCCCATACAATTCCTGTTCCCTGCAC
TGCAGCAACTGTACGAATGAAATCATTGGGCAAAGGCAGTATTATCATAT
CCAGGAGGTTCCGATAACGACCATCTTGCCGCAGAACTACTTCTGTCCCC
GCAACAGGATCCCAGTGTATCCTTCGGAGGAGGAGCTCTATTACGGCCTC
AACTATCTGGTCGTATGCTCCGAGCTGCTCGGCAACGGAGTCAAGACCAT
CGCAGGTCGTCGTCGCGTACTCTGCTCACGCTGCAAGAAGTGCGTAGGCG
AGTTTATTACCAGGGATGTGGGCGTGCAGCTGTACGCGGATGCCTTGCGA
TTTGTGACCTTGGACTCCCCACTCGAGTTCAAGGAGATCTTTGGCCATGT
GACACCCACCCAAATTATGATGCGCCTGGTGAACGACGGCGAAATCTGTG
GCCCGGATCAGAGACGCCTCTTCCTCAAGGCCGTGCGTCCGGATGGTCAG
TTGCAGTTATTGCACTTGGAGATGGATACCAAGCAGATGCACATTCTGCG
CTCCGAGCTGAAGTTGCCCGACATTAAAAAACCTGATATAGACTTACCCA
TGGAGGTCGATACCAGCAGCGAAAGTGATGTGGACATGAATGTGAGCGAT
ACGAGCAGCAGCAACTCCATGCCCCAAACAGGAGATGAAGAATTAGCTCC
AACACCCAGATCCACTACCCCCAGAGGAACTCCTACAAAGACCGTGCAAT
ATGTGCGGTTGCGTGGCTTTCGTGGCTGGCGCGTTAGGTACCTGTTCTCG
GGAAGTGATCGCGATCTGATCGAACACGACGATGTCTATATAAACTGGAC
CGATGAGGGAACCCGCCTTTTGTACATCTCCCACTTGATGATGGCAGACC
TCCTAAGCGAGTTCAATGCCAATGAGAACCTTGTGGCCAGTTTGGAGAAG
AAGCCGCTACCCACCAGGACTGATAATCCCCGGCAAAGCTGCATTATCTG
CGAGTCTGATAAAGAGTTCTATGCCAGGTACGAGCGACTTGCCAAGATTT
CTCAAGAGGGAGCAAGCTTTCTAGACCAT

BO18626.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:48:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG10013-RA 1398 CG10013-PA 1..1395 17..1411 6975 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:48:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG10013-RA 1690 CG10013-RA 131..1525 17..1411 6975 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:48:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12323651..12325045 17..1411 6975 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:48:52 has no hits.

BO18626.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:18 Download gff for BO18626.complete
Subject Subject Range Query Range Percent Splice Strand
CG10013-RA 129..1523 17..1413 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:59:29 Download gff for BO18626.complete
Subject Subject Range Query Range Percent Splice Strand
CG10013-RA 131..1525 17..1413 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:36 Download gff for BO18626.complete
Subject Subject Range Query Range Percent Splice Strand
CG10013-RA 131..1525 17..1413 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:27:36 Download gff for BO18626.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12323651..12325045 17..1413 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:59:29 Download gff for BO18626.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8149373..8150767 17..1413 99   Plus

BO18626.pep Sequence

Translation from 16 to 1429

> BO18626.pep
MSLDQVIINCMRSKNWINVLLLRSMDLFQPLLVESSNVSQLIEVSPNGIS
WHEKNVEYRIIMDEFFDIITRTNAGDVPITLVEMKGSHVSFGLYLRRIRY
SILDALTINVELGELPMCISPYNSCSLHCSNCTNEIIGQRQYYHIQEVPI
TTILPQNYFCPRNRIPVYPSEEELYYGLNYLVVCSELLGNGVKTIAGRRR
VLCSRCKKCVGEFITRDVGVQLYADALRFVTLDSPLEFKEIFGHVTPTQI
MMRLVNDGEICGPDQRRLFLKAVRPDGQLQLLHLEMDTKQMHILRSELKL
PDIKKPDIDLPMEVDTSSESDVDMNVSDTSSSNSMPQTGDEELAPTPRST
TPRGTPTKTVQYVRLRGFRGWRVRYLFSGSDRDLIEHDDVYINWTDEGTR
LLYISHLMMADLLSEFNANENLVASLEKKPLPTRTDNPRQSCIICESDKE
FYARYERLAKISQEGASFLDH

BO18626.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG10013-PA 465 CG10013-PA 1..465 1..465 2438 100 Plus
CG7326-PB 482 CG7326-PB 89..312 84..295 172 22 Plus
CG7326-PA 482 CG7326-PA 89..312 84..295 172 22 Plus