BO18648.complete Sequence
829 bp assembled on 2009-05-13
GenBank Submission: KX794972
> BO18648.complete
GAAGTTATCAGTCGACATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCAT
TCCTCTCGATATTTTTAGCGATTTATGCTCAATCACTTGATAAGCTGGTG
CCAAACTATGATAATGCCGAGCATCAAATGAAATTTTACGACATCAGATC
GCCGCTCGTTCTCAGCTGCAACGTGAAAGACGGTACGCCGGGCGGCGTGC
TCATATGGAAAAAGAACGGCACCGCTGTGACGGATGTACCTTCTCTCAGA
GGTCGCTTTAAGTTAATCGCAGACGAGAACAAGTTCATCATCGATAAGAC
GGATACGAACGACGATGGCAAATACAGTTGCGAGTTTGACGGCGTGTCCA
AGGAAATCGAAGTAATTGCCCGCGTTGTTGTACGAGTGCCTTCAAATACA
GCCGTTGTGGAGGGTGAAAAGATGTCGGTGACCTGCAGCGTTGTGGGTAC
CAAACCAGAGTTGACATGGACCTTTGCCAATGTAACGCTGACAAATGCCA
CAGATCGCTTCATTCTCAAACCAGACGATAATGGTGTTCCTAACGCCATT
CTGACACTGGATAATGTGACATTGGACGACAGAGGCGAATACAAATGCAT
TGGACGAAATGCGGCCAATGTCTACGGTGGGAACACCACCACTCCTGCCA
GCGACGTCACAACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCT
TTCCTGGGCATCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCAT
TTATGAGAAGCGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATC
CCCAAGAACAGGCAAGCTTTCTAGACCAT
BO18648.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:32:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bsg-RB | 798 | CG31605-PB | 1..795 | 17..811 | 3975 | 100 | Plus |
| Bsg-RH | 798 | CG31605-PH | 1..795 | 17..811 | 3975 | 100 | Plus |
| Bsg-RF | 798 | CG31605-PF | 1..795 | 17..811 | 3975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:32:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bsg-RB | 2744 | CG31605-RB | 373..1167 | 17..811 | 3975 | 100 | Plus |
| Bsg-RH | 3001 | CG31605-RH | 630..1424 | 17..811 | 3975 | 100 | Plus |
| Bsg-RF | 10170 | CG31605-RF | 726..1520 | 17..811 | 3975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:32:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8107237..8107448 | 476..687 | 1030 | 99.1 | Plus |
| 2L | 23513712 | 2L | 8106839..8107000 | 207..368 | 810 | 100 | Plus |
| 2L | 23513712 | 2L | 8107747..8107881 | 677..811 | 675 | 100 | Plus |
| 2L | 23513712 | 2L | 8105691..8105810 | 89..208 | 600 | 100 | Plus |
| 2L | 23513712 | 2L | 8107065..8107173 | 368..476 | 545 | 100 | Plus |
| 2L | 23513712 | 2L | 8089664..8089736 | 17..89 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:32:57 has no hits.
BO18648.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:25 Download gff for
BO18648.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg-RC | 695..1489 | 17..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:15 Download gff for
BO18648.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg-RF | 726..1520 | 17..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:21:00 Download gff for
BO18648.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg-RF | 726..1520 | 17..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:21:00 Download gff for
BO18648.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8089664..8089736 | 17..89 | 100 | -> | Plus |
| 2L | 8105692..8105809 | 90..207 | 100 | -> | Plus |
| 2L | 8106840..8107000 | 208..368 | 100 | -> | Plus |
| 2L | 8107066..8107173 | 369..476 | 100 | -> | Plus |
| 2L | 8107238..8107438 | 477..677 | 100 | -> | Plus |
| 2L | 8107748..8107881 | 678..813 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:15 Download gff for
BO18648.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8089664..8089736 | 17..89 | 100 | -> | Plus |
| arm_2L | 8105692..8105809 | 90..207 | 100 | -> | Plus |
| arm_2L | 8106840..8107000 | 208..368 | 100 | -> | Plus |
| arm_2L | 8107066..8107173 | 369..476 | 100 | -> | Plus |
| arm_2L | 8107238..8107438 | 477..677 | 100 | -> | Plus |
| arm_2L | 8107748..8107881 | 678..813 | 98 | | Plus |
BO18648.pep Sequence
Translation from 16 to 829
> BO18648.pep
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNAEHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTDVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAA
NVYGGNTTTPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEKRR
NKSELEESDTDPQEQASFLDH
BO18648.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:02:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bsg-PB | 265 | CG31605-PB | 1..265 | 1..265 | 1369 | 100 | Plus |
| Bsg-PH | 265 | CG31605-PH | 1..265 | 1..265 | 1369 | 100 | Plus |
| Bsg-PF | 265 | CG31605-PF | 1..265 | 1..265 | 1369 | 100 | Plus |
| Bsg-PA | 265 | CG31605-PA | 1..265 | 1..265 | 1369 | 100 | Plus |
| Bsg-PI | 265 | CG31605-PI | 1..265 | 1..265 | 1369 | 100 | Plus |
