BO18689.complete Sequence
751 bp assembled on 2009-05-13
> BO18689.complete
GAAGTTATCAGTCGACATGGTCACATACAATACTCTAATACAGAACGAAA
AGAATGAAAATGTGGTCGCCCCGATAAGCCGGCCATTCGCCAGAAAGAGG
AGGACTGAGATTCGCCGCCTGCAGTCCAACAGGCGGTTGAATAAAAAGGT
GTGCAAACACCATTTGGACATTGCCCATTGTACCCAGAAGAAGGCTCCAT
GGCGGAATTGGGCATACCTCATTCTCGCCCTCGCCGCAGGAATTGGCATG
TTATTGCAGTTCACCGACAAGTTGTCCACGGTCAGCGGATTCCTGGAAAG
CTACAAAAACCAGTACCACTCGATCGTCCACAACCAGGACAACTACTGCA
ATCCCTCCCGACGGCTGGGCGACATGGTCCTGCACGCCCGCCACCAGGTA
CTCAACCAGGATCTTGCATTGAACCAGCTAGAACTGGCACTGGACAACAC
CACCAATGAGGCAATCGTCTTGGTGGGCACCTCTGGCGTAGGCAAGAGCC
ACACTGCGCGAATCTTGCGCGAAACGTTTCCCTGGCCCGAGAACGTGAAT
ACACTCTCCTGGACCGGCAGTTCTTCTTTGGGCCGAGTGAAGAGCATGCT
ATCCGGCCTGACATATTGCGGACAGAATATGATCTTGATTGATAACATGA
CGCCGAAGGATGCACACTTCGTGCCTATCATTAACGAAATGATAAGTGAG
GGCGAAAAGAGCGCCAACCACACTGAGCATCCGGCAAGCTTTCTAGACCA
T
BO18689.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:29:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4880-RA | 1056 | CG4880-PA | 1..717 | 17..733 | 3585 | 100 | Plus |
CG4880-RB | 993 | CG4880-PB | 1..382 | 17..398 | 1910 | 100 | Plus |
CG4880-RB | 993 | CG4880-PB | 380..654 | 459..733 | 1375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:29:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4880-RA | 1700 | CG4880-RA | 150..866 | 17..733 | 3585 | 100 | Plus |
CG4880-RB | 1505 | CG4880-RB | 150..531 | 17..398 | 1910 | 100 | Plus |
CG4880-RB | 1505 | CG4880-RB | 529..803 | 459..733 | 1375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:29:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16886967..16887411 | 17..461 | 2225 | 100 | Plus |
X | 23542271 | X | 16887621..16887895 | 459..733 | 1375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:29:19 has no hits.
BO18689.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:36:59 Download gff for
BO18689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4880-RA | 138..855 | 17..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:56:38 Download gff for
BO18689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4880-RA | 150..867 | 17..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:19:36 Download gff for
BO18689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4880-RA | 150..867 | 17..735 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:19:36 Download gff for
BO18689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16886967..16887410 | 17..460 | 100 | -> | Plus |
X | 16887623..16887896 | 461..735 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:56:38 Download gff for
BO18689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16781000..16781443 | 17..460 | 100 | -> | Plus |
arm_X | 16781656..16781929 | 461..735 | 99 | | Plus |
BO18689.pep Sequence
Translation from 16 to 751
> BO18689.pep
MVTYNTLIQNEKNENVVAPISRPFARKRRTEIRRLQSNRRLNKKVCKHHL
DIAHCTQKKAPWRNWAYLILALAAGIGMLLQFTDKLSTVSGFLESYKNQY
HSIVHNQDNYCNPSRRLGDMVLHARHQVLNQDLALNQLELALDNTTNEAI
VLVGTSGVGKSHTARILRETFPWPENVNTLSWTGSSSLGRVKSMLSGLTY
CGQNMILIDNMTPKDAHFVPIINEMISEGEKSANHTEHPASFLDH
BO18689.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:53:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4880-PA | 351 | CG4880-PA | 1..239 | 1..239 | 1258 | 100 | Plus |
CG4880-PB | 330 | CG4880-PB | 1..218 | 1..239 | 1124 | 91.2 | Plus |
CG7557-PB | 336 | CG7557-PB | 104..243 | 104..234 | 224 | 36.4 | Plus |
CG7557-PA | 355 | CG7557-PA | 123..262 | 104..234 | 224 | 36.4 | Plus |