BO18690.complete Sequence
1030 bp assembled on 2009-05-13
GenBank Submission: KX797753
> BO18690.complete
GAAGTTATCAGTCGACATGTTCAAGCTAGTTTTTAAGCAGTACAAGTGCA
AAAGTACCAGTCCTGATTTAACGGAAGTTGTTAAGATCGATGATTGTGTA
GTCAAGGGGAATGATCAAGAAAAGAGTGATAATAATATTGTTCAACGATT
AAGTATCAGCAATGTAGAAAGCCTACAGACAATGCCAGGCGTTAAATCGC
CAAAAGATTGGCGAACCTATACATTAACTAACCATCCCGGCATTATTGTG
ATTCGGAATCCATTCTCGGAACGAGGCCGGCGTTATTGGAGCGCCCGATG
TCTGCGGGATTTTCCGCGAACGCCAAATATAGTCAATTTAAATGAAAGGC
TCTTCGATGAATCCGTCAGGTCGGACTGGTGGAAACAGCTTAATCTGTGC
AGCGATGGCGTTGAGTTCCAACGTATAAAATCCGCGATGCGTTGGACGAC
ATTTGGATATCATCACAACTGGGACACGAAGATCTATGATGAGGAGATGC
AGTCGCCGTTTCCCGAAGATTTGAGCAGTCTATGCGGATTGTTTGCGCAA
GCGTTGGGATACGCGGATTTTAAGCCAGAAGCCGCAATTGTAAATTACTA
TCCAGTTGGTAGTACGTTATCGGGTCACACAGATCACTCTGAACCAAACA
AATCGGCCCCTTTGTTTTCTTTTAGTTTTGGTCAGACTGCAATATTTCTA
ATTGGTGGAAGATCTTTAGAAGAAAAGCCAACCGCTATCTACCTTCAATC
CGGGGACGTTATGATAATGTCCGGAGAATCGCGTCTATGCTATCACGCAG
TTCCTCGTATCATCAAAACTCAGGCTTCCGCGACTTTATCACTGATAATT
GAAGATGTCGATAATGCAGATATTAAAACGCGTACAATTGATAAAGATTT
ATTTCATGATGTTGGCAACCCTCAATTTTGGGAGCCTTTTTCGAGATATA
TGGACGATTCACGTATTAATATTAATATACGTCAAGTTTTAAATCCAGGA
GATGTTAAGCTTGCAAGCTTTCTAGACCAT
BO18690.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:13:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AlkB-RA | 999 | CG33250-PA | 1..996 | 17..1012 | 4980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:13:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AlkB-RA | 1133 | CG33250-RA | 70..1066 | 16..1012 | 4985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:13:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15858600..15859141 | 675..134 | 2710 | 100 | Minus |
| X | 23542271 | X | 15858201..15858539 | 1012..674 | 1695 | 100 | Minus |
| X | 23542271 | X | 15859193..15859310 | 133..16 | 590 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:13:47 has no hits.
BO18690.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:09 Download gff for
BO18690.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AlkB-RA | 184..1174 | 22..1014 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:06 Download gff for
BO18690.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AlkB-RA | 76..1066 | 22..1014 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:13:48 Download gff for
BO18690.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AlkB-RA | 76..1066 | 22..1014 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:13:48 Download gff for
BO18690.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15858199..15858537 | 676..1014 | 99 | <- | Minus |
| X | 15858600..15859141 | 134..675 | 100 | <- | Minus |
| X | 15859193..15859304 | 22..133 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:06 Download gff for
BO18690.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15752232..15752570 | 676..1014 | 99 | <- | Minus |
| arm_X | 15752633..15753174 | 134..675 | 100 | <- | Minus |
| arm_X | 15753226..15753337 | 22..133 | 100 | | Minus |
BO18690.pep Sequence
Translation from 16 to 1030
> BO18690.pep
MFKLVFKQYKCKSTSPDLTEVVKIDDCVVKGNDQEKSDNNIVQRLSISNV
ESLQTMPGVKSPKDWRTYTLTNHPGIIVIRNPFSERGRRYWSARCLRDFP
RTPNIVNLNERLFDESVRSDWWKQLNLCSDGVEFQRIKSAMRWTTFGYHH
NWDTKIYDEEMQSPFPEDLSSLCGLFAQALGYADFKPEAAIVNYYPVGST
LSGHTDHSEPNKSAPLFSFSFGQTAIFLIGGRSLEEKPTAIYLQSGDVMI
MSGESRLCYHAVPRIIKTQASATLSLIIEDVDNADIKTRTIDKDLFHDVG
NPQFWEPFSRYMDDSRININIRQVLNPGDVKLASFLDH
BO18690.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:53:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AlkB-PA | 332 | CG33250-PA | 1..332 | 1..332 | 1770 | 100 | Plus |
