BO18693.complete Sequence
997 bp assembled on 2009-05-13
GenBank Submission: KX794192
> BO18693.complete
GAAGTTATCAGTCGACATGTTCCACTCACTTGTTTTGATGGCCTGCGCCC
TTGCCGCCCTCTCCGTCGCCCAGGGGGCGGGGTCCGCTCGATCCAAATCG
CTGCCGTTATCGCTATCGCTATCGGTATCGGTATCCTCGTCATTGGCATC
GGCATCCAGTCCAGGAGCTGCTGCTGACCCAACAGCCGCCTTCACCGTCA
CCGCGACCGCCCCCACCCCCGCAAGTGCTCCCTTTGCCGGCAAACAGCTA
AACAGATGCCGTCAAAGTTGCTATCAGCAGCTTTCCAAGGACTGGCATTA
TTGTAAGGATTCCGTTGATTGCACAAACTGCTGCCAAAAGCTGGTGGCAC
CATTCGAGTTGCGTATCCTGAAGGCCCAGCGCCAGGAGTCGCTCGTCCTA
ACGGACATCGGCTGGGATGAGATGATAGCGAATGCCTCGCGCCAGTGCCT
CATCACCTGGGAAGTGTCCGGCGGCGGGCTCATCGGCAATCTGCTAACGG
ACACCGCACGGGCGGAACTCTCCTTGTGGCCGGACACCGTCTACAACATC
CAGGTCAAGTGCAAGCACAAGCTCACGGGTCTGATGCGACGTTCGATCAA
GCTAAATGTGGACACCAGCCAGTTGGTGGGCACAACAACGACCACGACGA
CCAGTAAATCGAGTATCCAGCGGCAGCATTTGGAGCAGCCAGTGGATCAT
ACTGATGCCTTGGAGCACTCGCAGCACATTCGCATCCCGCGGCCCACGGA
TCGTGTGTATATAATCAGTGCACTGCCCACGCCCAGCGAACTGGGCGGTG
TGGTTTATCCGGCCTTCGGGGCGCTGGCCTTCTTCCTGGCCCTGCTGGTC
ATGTTCCTCTTCCTGCGTCCGCAGCGCAAGCGATTCCCTCTGGATGCGGA
CAGTGCGGACACGGCAACGTTGATAGGTCGCAGTTCGAGCAGCTCGAGGA
ACTCAATGGACGCCTCTACGCTGCATGTCGCAAGCTTTCTAGACCAT
BO18693.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:55:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fend-RC | 966 | CG12664-PC | 1..963 | 17..979 | 4815 | 100 | Plus |
| fend-RB | 966 | CG12664-PB | 1..963 | 17..979 | 4815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:55:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fend-RC | 5133 | CG12664-RC | 895..1859 | 15..979 | 4825 | 100 | Plus |
| fend-RB | 3566 | CG12664-RB | 836..1800 | 15..979 | 4825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:55:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9125247..9125656 | 979..570 | 2050 | 100 | Minus |
| X | 23542271 | X | 9133940..9134205 | 280..15 | 1330 | 100 | Minus |
| X | 23542271 | X | 9126060..9126302 | 571..329 | 1215 | 100 | Minus |
| X | 23542271 | X | 9127066..9127117 | 328..277 | 260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:55:05 has no hits.
BO18693.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:05 Download gff for
BO18693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fend-RB | 821..1778 | 22..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:02:19 Download gff for
BO18693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fend-RB | 843..1800 | 22..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:28:59 Download gff for
BO18693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fend-RB | 843..1800 | 22..981 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:28:59 Download gff for
BO18693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9125245..9125654 | 572..981 | 99 | <- | Minus |
| X | 9126060..9126302 | 329..571 | 100 | <- | Minus |
| X | 9127066..9127113 | 281..328 | 100 | <- | Minus |
| X | 9133940..9134198 | 22..280 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:02:19 Download gff for
BO18693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9027973..9028231 | 22..280 | 100 | | Minus |
| arm_X | 9020093..9020335 | 329..571 | 100 | <- | Minus |
| arm_X | 9021099..9021146 | 281..328 | 100 | <- | Minus |
| arm_X | 9019278..9019687 | 572..981 | 99 | <- | Minus |
BO18693.pep Sequence
Translation from 16 to 997
> BO18693.pep
MFHSLVLMACALAALSVAQGAGSARSKSLPLSLSLSVSVSSSLASASSPG
AAADPTAAFTVTATAPTPASAPFAGKQLNRCRQSCYQQLSKDWHYCKDSV
DCTNCCQKLVAPFELRILKAQRQESLVLTDIGWDEMIANASRQCLITWEV
SGGGLIGNLLTDTARAELSLWPDTVYNIQVKCKHKLTGLMRRSIKLNVDT
SQLVGTTTTTTTSKSSIQRQHLEQPVDHTDALEHSQHIRIPRPTDRVYII
SALPTPSELGGVVYPAFGALAFFLALLVMFLFLRPQRKRFPLDADSADTA
TLIGRSSSSSRNSMDASTLHVASFLDH
BO18693.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:53:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fend-PC | 321 | CG12664-PC | 1..321 | 1..321 | 1634 | 100 | Plus |
| fend-PB | 321 | CG12664-PB | 1..321 | 1..321 | 1634 | 100 | Plus |
