BO18695.complete Sequence
694 bp assembled on 2009-05-13
GenBank Submission: KX795109
> BO18695.complete
GAAGTTATCAGTCGACATGAAAGCTTTCATTATCGCCGGAGTGTGCGTGT
TGAGCGTGCTGAGCCTGGGATCCGCTCAGTTCCAGAACGGACGTCTGGAG
CCGCCGAATCCGCAGCTCTGTGCCCAGCGTGTCATTCACGAGAAGACTCC
CGATGGCAAGGGTTACTTCTTCTCGTGGCGCGACCCTCAGCTGAAGGGCG
TGGAGGAGGACTGGCTGACCGCCAGGAACTACTGCCGCAGGCGCTGCATG
GACTCCGTTTCCCTGGAGACCAGTTTGGAGAACGAGTGGATCAAGCAGTA
TGTTGTGCGCGAGAATGTGAAATACATCTGGACCAGCGGCCGCTTGTGTG
ACTTCAAGGGCTGTGACCGCCCCGATCTGCAGCCCACAAACATCAACGGT
TGGTTCTGGACCGCCACACTGCAGAAACTGGCACCAACCACTGAGAGGAA
CCAGGGCGATTGGTCGCCCACCGGAGGCATTGGCCTGCCCCAGCCGGACA
ACCGCGAGTACAAGCAGAATGGAGCGCCGGAGAATTGTCTCGCCCTGCTG
AATCAGTTCTACAACGATGGCGTAAACTGGCACGATGTGGCATGCCATCA
CAAGAAGAGCTTCGTCTGCGAGGAGAACGATGCTCTGCTGAAGTATGTGC
GCTACACGAACCCCAATCTGCGCATCGCAAGCTTTCTAGACCAT
BO18695.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:32:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4115-RA | 663 | CG4115-PA | 1..660 | 17..676 | 3300 | 100 | Plus |
| CG6055-RB | 660 | CG6055-PB | 185..254 | 201..270 | 185 | 84.3 | Plus |
| CG6055-RA | 660 | CG6055-PA | 185..254 | 201..270 | 185 | 84.3 | Plus |
| CG6055-RB | 660 | CG6055-PB | 538..648 | 557..667 | 180 | 77.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:32:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4115-RA | 1115 | CG4115-RA | 123..782 | 17..676 | 3300 | 100 | Plus |
| CG6055-RB | 1034 | CG6055-RB | 271..340 | 201..270 | 185 | 84.3 | Plus |
| CG6055-RA | 1087 | CG6055-RA | 324..393 | 201..270 | 185 | 84.3 | Plus |
| CG6055-RB | 1034 | CG6055-RB | 624..734 | 557..667 | 180 | 77.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:32:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12362563..12362922 | 317..676 | 1800 | 100 | Plus |
| 3R | 32079331 | 3R | 12360336..12360492 | 162..318 | 785 | 100 | Plus |
| 3R | 32079331 | 3R | 12360130..12360275 | 17..162 | 730 | 100 | Plus |
| 2L | 23513712 | 2L | 7471730..7471799 | 201..270 | 185 | 84.3 | Plus |
| 2L | 23513712 | 2L | 7472083..7472193 | 557..667 | 180 | 77.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:32:51 has no hits.
BO18695.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:04 Download gff for
BO18695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4115-RA | 120..779 | 17..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:01:40 Download gff for
BO18695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4115-RA | 120..779 | 17..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:04:04 Download gff for
BO18695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4115-RA | 123..782 | 17..678 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:04:04 Download gff for
BO18695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12360130..12360275 | 17..162 | 100 | -> | Plus |
| 3R | 12360337..12360490 | 163..316 | 100 | -> | Plus |
| 3R | 12362563..12362922 | 317..678 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:01:40 Download gff for
BO18695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8186059..8186212 | 163..316 | 100 | -> | Plus |
| arm_3R | 8185852..8185997 | 17..162 | 100 | -> | Plus |
| arm_3R | 8188285..8188644 | 317..678 | 99 | | Plus |
BO18695.pep Sequence
Translation from 16 to 694
> BO18695.pep
MKAFIIAGVCVLSVLSLGSAQFQNGRLEPPNPQLCAQRVIHEKTPDGKGY
FFSWRDPQLKGVEEDWLTARNYCRRRCMDSVSLETSLENEWIKQYVVREN
VKYIWTSGRLCDFKGCDRPDLQPTNINGWFWTATLQKLAPTTERNQGDWS
PTGGIGLPQPDNREYKQNGAPENCLALLNQFYNDGVNWHDVACHHKKSFV
CEENDALLKYVRYTNPNLRIASFLDH
BO18695.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:53:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4115-PA | 220 | CG4115-PA | 1..220 | 1..220 | 1228 | 100 | Plus |
| CG6055-PB | 219 | CG6055-PB | 22..219 | 26..220 | 666 | 59.3 | Plus |
| CG6055-PA | 219 | CG6055-PA | 22..219 | 26..220 | 666 | 59.3 | Plus |
| Clect27-PB | 231 | CG3244-PB | 10..231 | 4..220 | 498 | 44.4 | Plus |
| Clect27-PA | 231 | CG3244-PA | 10..231 | 4..220 | 498 | 44.4 | Plus |
