BO18696.complete Sequence
1090 bp assembled on 2009-05-13
GenBank Submission: KX799091
> BO18696.complete
GAAGTTATCAGTCGACATGGCCTCCGCGGAGCAAAGAACCGAAGTGGACG
CCCTTATGATGGGGCCGATCTCGAAACTAAGCATGCTGCTCACTGTGGTG
TCCATTCTGTGGCGCTTCGTCTCGATTTGCATCAACTGGAGCCTGGCGTA
CGTGTACTGGATGGAGGAGTCCTACGGATACTGCGCCTGGACCATTGGCT
CCATTCTGGTGCCCATGGTGGTCACATCGGTCATATATATACATACCTTG
AAGAGCGCTCATGCCGGCGAAAAACGCATCCTGGAGCGAGGGGTGTACTC
AAATGCTGTGATCTCATATCTCTTCCGCGATGTCTATGTCCTAAACTATG
CGTTCAAATACTCGTTGGCCAAGGAGCGGGATGACAAGCAGGCGGAGATC
GAATATTACCAAAAACTCATGACGGAGGAGTGCAATGTTAGTTTCGTTCG
TCTATTCGACTCGTTTTTGGAATCAGCACCGCAGAAAATACTACAGCTGG
CAATTCTTTTGCAATCGACATTGGAGTTCACATACTACCGCCACATCGCC
CTGATCGTCTACTTCGGCAACATAGCGTGGTGCATCCAGGCGTACAATCA
CTCCAATCGCCTGGCCCAACTGGACAAACATGATATTGCGGCGAAGGGAC
GATTTCTGCAATTTCTCTTCCTGCTCTGCCTCACTGTTTCGAGAACGCTT
TGCATCGCGTATGTGGCCAGTATTTTTCCCATCGAAACGCTGATCATCTG
CGCGACACTGGCTTGCTTTTACGGCACCATTGTGTTCTTTGTGGACTCGC
CAATGATCGCAAAATCCCGCCCCATGAACTATTCGTACTGCCTGTGCTTT
GGCGTTGTCTATCTATTTATTTTTACGCCCGTCAAGGATGCACCAACCAA
ATATAAGTACGCCTTCTATCTCACATTCTGTTTGTTGCAAAATATCATCG
CCTGCGCTTTGTACATTCCCTTGTATCTTGCCACAGCCATCATTGCCTTG
TATATTGTCGGAATTGTTCTGTTAATAATCTACTACACGTACTGCCATCC
AAATACTGTGCGTACTTATTTTGCAAGCTTTCTAGACCAT
BO18696.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:13:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32579-RA | 1059 | CG32579-PA | 1..1056 | 17..1072 | 5280 | 100 | Plus |
| CG32579-RB | 1080 | CG32579-PB | 1..1077 | 17..1072 | 5035 | 98.1 | Plus |
| CG32579-RC | 714 | CG32579-PC | 1..670 | 17..686 | 3350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:13:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32579-RA | 1296 | CG32579-RA | 180..1238 | 14..1072 | 5295 | 100 | Plus |
| CG32579-RB | 1317 | CG32579-RB | 180..1259 | 14..1072 | 5050 | 98.1 | Plus |
| CG32579-RC | 1009 | CG32579-RC | 180..852 | 14..686 | 3365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:13:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16324676..16325062 | 686..1072 | 1935 | 100 | Plus |
| X | 23542271 | X | 16323465..16323697 | 14..246 | 1165 | 100 | Plus |
| X | 23542271 | X | 16323774..16323929 | 247..402 | 780 | 100 | Plus |
| X | 23542271 | X | 16324442..16324601 | 527..686 | 770 | 98.8 | Plus |
| X | 23542271 | X | 16324079..16324209 | 403..533 | 655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:13:13 has no hits.
BO18696.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:17 Download gff for
BO18696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32579-RA | 181..1236 | 17..1074 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:42:46 Download gff for
BO18696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32579-RA | 183..1238 | 17..1074 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:47:54 Download gff for
BO18696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32579-RA | 183..1238 | 17..1074 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:47:54 Download gff for
BO18696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16323468..16323697 | 17..246 | 100 | -> | Plus |
| X | 16323774..16323929 | 247..402 | 100 | -> | Plus |
| X | 16324079..16324209 | 403..533 | 100 | -> | Plus |
| X | 16324449..16324601 | 534..686 | 100 | -> | Plus |
| X | 16324677..16325062 | 687..1074 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:42:46 Download gff for
BO18696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16217501..16217730 | 17..246 | 100 | -> | Plus |
| arm_X | 16217807..16217962 | 247..402 | 100 | -> | Plus |
| arm_X | 16218112..16218242 | 403..533 | 100 | -> | Plus |
| arm_X | 16218482..16218634 | 534..686 | 100 | -> | Plus |
| arm_X | 16218710..16219095 | 687..1074 | 99 | | Plus |
BO18696.pep Sequence
Translation from 16 to 1090
> BO18696.pep
MASAEQRTEVDALMMGPISKLSMLLTVVSILWRFVSICINWSLAYVYWME
ESYGYCAWTIGSILVPMVVTSVIYIHTLKSAHAGEKRILERGVYSNAVIS
YLFRDVYVLNYAFKYSLAKERDDKQAEIEYYQKLMTEECNVSFVRLFDSF
LESAPQKILQLAILLQSTLEFTYYRHIALIVYFGNIAWCIQAYNHSNRLA
QLDKHDIAAKGRFLQFLFLLCLTVSRTLCIAYVASIFPIETLIICATLAC
FYGTIVFFVDSPMIAKSRPMNYSYCLCFGVVYLFIFTPVKDAPTKYKYAF
YLTFCLLQNIIACALYIPLYLATAIIALYIVGIVLLIIYYTYCHPNTVRT
YFASFLDH
BO18696.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:01:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32579-PA | 352 | CG32579-PA | 1..352 | 1..352 | 1835 | 100 | Plus |
| CG32579-PB | 359 | CG32579-PB | 1..359 | 1..352 | 1817 | 98.1 | Plus |
| CG32579-PC | 237 | CG32579-PC | 1..223 | 1..223 | 1151 | 100 | Plus |
