BO18712.complete Sequence
670 bp assembled on 2009-05-13
GenBank Submission: KX799893
> BO18712.complete
GAAGTTATCAGTCGACATGAGCCACTTGGGCCTTGCGGATGTGCACCAGT
CCGAGGATGCCACTCCTGACCTGGAATCCTTCACTGGCTTCGGCAACTCC
GCCGCCGAGGCCTTCATTCAAAGTCTCGCAGGAATGGTGAATCAGGGCGA
TGTGGAGACCATGATACGGGCTCAAAAGCAAATGCTGCAACGCTTTGAGA
AAACCAACGAGATGCTGCTCAACTGCAATGCCTTATCGCAGAGTCGTTTG
AAAAGTGCCAGCGAGGATTTCAAAAGACACGTGAAATGCCTGAGCGAAAT
GAAGAAGGATCTGGATTACATATTCCGCAAGATACGGATCATCAAGCAGA
AGCTACAGTCGCAGTTTCCCGCCATTTACGCCGAAGTTCAGCCGCAGCGT
AGCAGTTTGGCTGAGGAAGCCGAGGATGATACGGAAGCCCAGGCTAAAAA
GACTGCAGAAACACCTGCTCCTGCTGCCGCAAAACCTGTCCTATCCACCA
AGAAAAGTGCCGCCACCATAGAGTACGTGCAGATGGAGGAGGCAGTGGAC
AATGGCACTGTGGAGATCGAAAACGAGCTGATCAAGCGAGTTTGTTCCGT
GGAAACTGCCAATCCCAATGATTCCTCCGACTGCACATCCGAGGATACAG
GTGCAAGCTTTCTAGACCAT
BO18712.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:06:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10681-RB | 639 | CG10681-PB | 1..636 | 17..652 | 3180 | 100 | Plus |
| CG10681-RA | 639 | CG10681-PA | 1..636 | 17..652 | 3180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:06:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10681-RB | 1027 | CG10681-RB | 217..852 | 17..652 | 3180 | 100 | Plus |
| CG10681-RA | 1023 | CG10681-RA | 213..848 | 17..652 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:06:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12502004..12502472 | 184..652 | 2345 | 100 | Plus |
| 3L | 28110227 | 3L | 12501781..12501948 | 17..184 | 840 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:06:17 has no hits.
BO18712.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:00 Download gff for
BO18712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10681-RA | 125..760 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:37:19 Download gff for
BO18712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10681-RA | 213..848 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:00:04 Download gff for
BO18712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10681-RA | 213..848 | 17..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:00:04 Download gff for
BO18712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12502004..12502472 | 184..654 | 99 | | Plus |
| 3L | 12501781..12501947 | 17..183 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:37:19 Download gff for
BO18712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12494881..12495047 | 17..183 | 100 | -> | Plus |
| arm_3L | 12495104..12495572 | 184..654 | 99 | | Plus |
BO18712.pep Sequence
Translation from 16 to 670
> BO18712.pep
MSHLGLADVHQSEDATPDLESFTGFGNSAAEAFIQSLAGMVNQGDVETMI
RAQKQMLQRFEKTNEMLLNCNALSQSRLKSASEDFKRHVKCLSEMKKDLD
YIFRKIRIIKQKLQSQFPAIYAEVQPQRSSLAEEAEDDTEAQAKKTAETP
APAAAKPVLSTKKSAATIEYVQMEEAVDNGTVEIENELIKRVCSVETANP
NDSSDCTSEDTGASFLDH
BO18712.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:53:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10681-PB | 212 | CG10681-PB | 1..212 | 1..212 | 1062 | 100 | Plus |
| CG10681-PA | 212 | CG10681-PA | 1..212 | 1..212 | 1062 | 100 | Plus |
