Clone BO18721 Report

Search the DGRC for BO18721

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:187
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG4802-RA
Protein status:BO18721.pep: Imported from assembly
Sequenced Size:901

Clone Sequence Records

BO18721.complete Sequence

901 bp assembled on 2009-05-13

GenBank Submission: KX794625

> BO18721.complete
GAAGTTATCACTCGACATGATTACGATTAAATGTAAAGACACCAATCTGG
ACCCGCTTCCGGTCAAGATTGGTATTATTGGCGGTTCGGGGCTTGACGAC
CCAGATATCCTGGAACAGCGGCAGGAACGTGTGGTGGAGACGCCCTACGG
AGAACCGTCTGATGCATTGATTGAAGGCGAGATCAATGGAGTACAGTGCG
TACTCCTGGCGCGTCATGGACGCAAGCACGACATCATGCCCTCCAATGTT
AACTACCGGGCCAACATCTGGGCTCTACGCGATGTGGGCTGCACCCACTT
AATTGTCTCCACGGCATGTGGATCGTTGCGCGAGGAAATCAAGCCGGGCA
ACCTGGTTGTTCCACACGACTTTATCGACAGGACTACTAAACGCCTTCAG
ACCTTCTACGATGGCAAGGCACAAAGTCCACGTGGTGTTTGCCACCTGCC
CATGTTTCCGGCATTCAGCGAACGCACCCGCAACATTCTGCTTCAGGCGG
CCAAGGAGCTGGAGATTCCCGCCCACGATAAGGCCACCATTGTGACTATT
GAGGGTCCGCGCTTCTCCTCTCGCTCGGAGAGCCACATGTTCCGTCAGTG
GGGCGGGGACCTCATAAACATGACCACGTGTCCAGAAGTGGTGCTAGCCA
AGGAGGCTGGCCTACTTTACGGGTCGGTGGCCATTGCCACGGACTACGAC
TGCTGGCGCATGGGTTGCGAGGGTGTCAACGTGCAGGATGTCCTCCGTAC
TTTTGCCGAGAACGTAATTAAGGTGAAGAAGATTCTGGTCAACGCTGTTG
GTCGAATTGCCAAGGAGGACTGGTCGGAGGACATACTAAATGCCAAGCAA
TGCGTTTGCAACAACACAATGTCTGGAGCCATGGCAAGCTTTCTAGACCA
T

BO18721.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:54:21
Subject Length Description Subject Range Query Range Score Percent Strand
Mtap-RC 870 CG4802-PC 1..867 17..883 4335 100 Plus
Mtap-RB 1083 CG4802-PB 1..867 17..883 4335 100 Plus
Mtap-RA 870 CG4802-PA 1..867 17..883 4335 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:54:22
Subject Length Description Subject Range Query Range Score Percent Strand
Mtap-RC 1392 CG4802-RC 248..1115 16..883 4340 100 Plus
Mtap-RB 1234 CG4802-RB 90..957 16..883 4340 100 Plus
Mtap-RA 1234 CG4802-RA 90..957 16..883 4340 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:54:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17428162..17428943 66..847 3910 100 Plus
2R 25286936 2R 17428042..17428093 16..67 260 100 Plus
2R 25286936 2R 17429001..17429038 846..883 190 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:54:20 has no hits.

BO18721.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:01 Download gff for BO18721.complete
Subject Subject Range Query Range Percent Splice Strand
CG4802-RA 324..1190 17..885 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:14 Download gff for BO18721.complete
Subject Subject Range Query Range Percent Splice Strand
CG4802-RA 91..957 17..885 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:29:23 Download gff for BO18721.complete
Subject Subject Range Query Range Percent Splice Strand
Mtap-RA 91..957 17..885 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:29:23 Download gff for BO18721.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17428043..17428093 17..67 100 -> Plus
2R 17428164..17428943 68..847 100 -> Plus
2R 17429003..17429038 848..885 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:14 Download gff for BO18721.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13315548..13315598 17..67 100 -> Plus
arm_2R 13315669..13316448 68..847 100 -> Plus
arm_2R 13316508..13316543 848..885 94   Plus

BO18721.pep Sequence

Translation from 16 to 901

> BO18721.pep
MITIKCKDTNLDPLPVKIGIIGGSGLDDPDILEQRQERVVETPYGEPSDA
LIEGEINGVQCVLLARHGRKHDIMPSNVNYRANIWALRDVGCTHLIVSTA
CGSLREEIKPGNLVVPHDFIDRTTKRLQTFYDGKAQSPRGVCHLPMFPAF
SERTRNILLQAAKELEIPAHDKATIVTIEGPRFSSRSESHMFRQWGGDLI
NMTTCPEVVLAKEAGLLYGSVAIATDYDCWRMGCEGVNVQDVLRTFAENV
IKVKKILVNAVGRIAKEDWSEDILNAKQCVCNNTMSGAMASFLDH

BO18721.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:53:36
Subject Length Description Subject Range Query Range Score Percent Strand
Mtap-PB 360 CG4802-PB 1..293 1..293 1532 99 Plus
Mtap-PC 289 CG4802-PC 1..289 1..289 1526 100 Plus
Mtap-PA 289 CG4802-PA 1..289 1..289 1526 100 Plus
CG31115-PB 290 CG31115-PB 14..285 12..283 792 51.5 Plus