Clone BO18794 Report

Search the DGRC for BO18794

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:187
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptTap42-RA
Protein status:BO18794.pep: Imported from assembly
Sequenced Size:1174

Clone Sequence Records

BO18794.complete Sequence

1174 bp assembled on 2009-05-13

GenBank Submission: KX798214

> BO18794.complete
GAAGTTATCAGTCGACATGGCTGAGGGTAATACCGCTGGCGGAGAGGACC
AAAAGCTGACGGACATCTTTCTAAAGGGCTGGAACATATTCGACGAGCTA
GAAGTTACCGAACTGCCCTTCAATGGCAGCGAATTTCAGAACAAAGTGAA
GACTGCAATGGGCCTTTTCGAGCAGGCCACCGTCATTGTGAACCAGGTTA
GCATGTTCAGTGCCAACGAGTTGATCGACGAGGTGTCCACGGAATCGCTA
CCATTCATGCTGCTCCCTTACTTTCTGGGCAAGCTTACCACTAAGATCAA
CAGCCCCAATAACACACACTCCATAGAGCTGGGCGAGATTTACTTCAAGG
ACCACCTGCAGCGTTGCCAGGAGTATGATCTCTGTGCAGCGCCCAAATCT
CAGGTGGCTAAGGCGGATAGCCAAGCGGAAAAAAGCGAGCAGCGCGAGCT
GGTAGAGGCAGCCTTCAATAGAAACGACAAAATAGCCCAGTATCGCCGGA
TGAAGGAGATTGACGAGTATATGGCCAGAATGCGCGATGCAGTCAAGAAC
AAAACGGTCGACGATGAGGATAAACGTGTCTTTTTCCTCAAGTATTTGGA
CAAGAGTATAATAGACTCCAAGCAGGAATTAGAAACATTGGGCGTAATGA
AGCAGCTGGCCCAGATGCGCCTTGCCCGATTGGCTGGTGGCGAATCCGAC
AACGAAGTGGATTCGTTCCGTCCACCGAATCAAAATCAATCTTCTGCATC
GTCCACCTCCCGCGGTCATGGTCACAGCCACGGACCCGGACACCACCACC
ATCATCAGCAGGCCGCTAAGCCAAAGCCCTTGCAGCCCTTCATCATAACA
CGTAATGCCACCCAGAAGGCGGTTTTCGGCTTGGGATACCCCAGTTTGCC
CATTATGACTGTTGATGAATTCTACCAGCAGCGCGTCGACGAGGGCATCT
TTCCTGATGAGGAGAAGGTTGCCAAGATGAATCAGGCACAGGCCATCGCG
GCCGCCCGGGATCCCAACGAAAAAGAGGACGAGGAGAAGGCCGTTGAGGA
GCTACAGGCGGAGCAGGATGATCCCGAGTATATAGACCGCATGAGGCGCA
TGGATGAATACAAGGATGTGGTGCGTCGCGGTGACGGCAACCGTCATAAC
CGTAGTGCAAGCTTTCTAGACCAT

BO18794.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:45:46
Subject Length Description Subject Range Query Range Score Percent Strand
Tap42-RA 1143 CG31852-PA 1..1140 17..1156 5700 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:45:47
Subject Length Description Subject Range Query Range Score Percent Strand
Tap42-RA 1335 CG31852-RA 108..1247 17..1156 5700 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:45:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13367915..13368933 138..1156 5095 100 Plus
2L 23513712 2L 13367724..13367846 17..139 615 100 Plus
Blast to na_te.dros performed on 2014-11-27 15:45:45 has no hits.

BO18794.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:03 Download gff for BO18794.complete
Subject Subject Range Query Range Percent Splice Strand
Tap42-RA 109..1248 17..1158 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:52 Download gff for BO18794.complete
Subject Subject Range Query Range Percent Splice Strand
Tap42-RA 108..1247 17..1158 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:15:56 Download gff for BO18794.complete
Subject Subject Range Query Range Percent Splice Strand
Tap42-RA 108..1247 17..1158 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:15:56 Download gff for BO18794.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13367724..13367846 17..139 100 -> Plus
2L 13367917..13368933 140..1158 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:52 Download gff for BO18794.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13367724..13367846 17..139 100 -> Plus
arm_2L 13367917..13368933 140..1158 99   Plus

BO18794.pep Sequence

Translation from 16 to 1174

> BO18794.pep
MAEGNTAGGEDQKLTDIFLKGWNIFDELEVTELPFNGSEFQNKVKTAMGL
FEQATVIVNQVSMFSANELIDEVSTESLPFMLLPYFLGKLTTKINSPNNT
HSIELGEIYFKDHLQRCQEYDLCAAPKSQVAKADSQAEKSEQRELVEAAF
NRNDKIAQYRRMKEIDEYMARMRDAVKNKTVDDEDKRVFFLKYLDKSIID
SKQELETLGVMKQLAQMRLARLAGGESDNEVDSFRPPNQNQSSASSTSRG
HGHSHGPGHHHHHQQAAKPKPLQPFIITRNATQKAVFGLGYPSLPIMTVD
EFYQQRVDEGIFPDEEKVAKMNQAQAIAAARDPNEKEDEEKAVEELQAEQ
DDPEYIDRMRRMDEYKDVVRRGDGNRHNRSASFLDH

BO18794.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:53:40
Subject Length Description Subject Range Query Range Score Percent Strand
Tap42-PA 380 CG31852-PA 1..380 1..380 1968 100 Plus