BO18806.complete Sequence
604 bp assembled on 2009-05-13
GenBank Submission: KX797859
> BO18806.complete
GAAGTTATCAGTCGACATGCGTACCATTAATTCCAACCAGTGCGTGAAGA
TCCCTAAGGATATCAAGGCCTCGGTGAAGGCCCGTGTGGTGACCATCACC
GGCACCCGCGGCACCCTGAAGCGCAGCTTCAAGCACTTGGCTCTGGACAT
GTACATGCCCGACAAGCGCACCCTGAAGGTGGAGAAGTGGTTCGGAACCA
AGAAGGAGTTGGCCGCCGTCCGCACCGTCTGCAGTCACATCGAGAACATG
ATCAAGGGAGTCACGTTTGGATTCCAGTACAAGATGCGTGCTGTGTACGC
CCATTTCCCCATCAACTGTGTCACCTCCGAGAACAACACGGTCATTGAGA
TCCGTAACTTCTTGGGTGAGAAGTACATCCGTCGTGTGGAGATGGCTCCT
GGCGTCACCGTGGTCAACTCCACTGCCCAGAAGGACGAACTTATCGTGGA
GGGAAACGATATTGAGTCTGTCTCCGGATCTGCCGCCCTCATCCAGCAGT
CCACGACCGTCAAGAACAAGGATATCCGTAAGTTCCTTGACGGTCTGTAC
GTGTCCGAGAAGACGACCGTTGTGAAGCTAGAGTCTGCAAGCTTTCTAGA
CCAT
BO18806.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:54:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL9-RC | 573 | CG6141-PC | 1..570 | 17..586 | 2850 | 100 | Plus |
RpL9-RB | 573 | CG6141-PB | 1..570 | 17..586 | 2850 | 100 | Plus |
RpL9-RA | 573 | CG6141-PA | 1..570 | 17..586 | 2850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:54:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL9-RC | 807 | CG6141-RC | 86..655 | 17..586 | 2850 | 100 | Plus |
RpL9-RB | 798 | CG6141-RB | 159..728 | 17..586 | 2850 | 100 | Plus |
RpL9-RA | 761 | CG6141-RA | 122..691 | 17..586 | 2850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:54:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11002910..11003239 | 586..257 | 1650 | 100 | Minus |
2L | 23513712 | 2L | 11003510..11003751 | 258..17 | 1210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:54:56 has no hits.
BO18806.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:36:40 Download gff for
BO18806.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL9-RB | 128..697 | 17..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:32 Download gff for
BO18806.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL9-RA | 122..691 | 17..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:29:39 Download gff for
BO18806.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL9-RA | 122..691 | 17..588 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:29:39 Download gff for
BO18806.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11002908..11003238 | 258..588 | 99 | <- | Minus |
2L | 11003511..11003751 | 17..257 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:32 Download gff for
BO18806.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11002908..11003238 | 258..588 | 99 | <- | Minus |
arm_2L | 11003511..11003751 | 17..257 | 100 | | Minus |
BO18806.pep Sequence
Translation from 16 to 604
> BO18806.pep
MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDK
RTLKVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPIN
CVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIE
SVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVKLESASFLDH
BO18806.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:52:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL9-PC | 190 | CG6141-PC | 1..190 | 1..190 | 960 | 100 | Plus |
RpL9-PB | 190 | CG6141-PB | 1..190 | 1..190 | 960 | 100 | Plus |
RpL9-PA | 190 | CG6141-PA | 1..190 | 1..190 | 960 | 100 | Plus |