Clone BO18809 Report

Search the DGRC for BO18809

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:188
Well:9
Vector:pDNR-Dual
Associated Gene/TranscriptCG7409-RA
Protein status:BO18809.pep: Imported from assembly
Sequenced Size:496

Clone Sequence Records

BO18809.complete Sequence

496 bp assembled on 2009-05-13

GenBank Submission: KX799009

> BO18809.complete
GAAGTTATCAGTCGACATGGCTCTTGTCCCGGCTACAAACAATACGGATT
GGGATTACTGGGATTACCGTCGTCGGCTGTGGCGCGATTGGGATTTGAAC
GACTGGGACTTGCCCTACTGGAAGCGATCACTATCTCGCGTTGGATCCGC
ACCCGATCTAAGTCGGGTAATTGTCGGAAAGGATGGTTTCGAGGCCAATG
TGGATGTGCACCTGTTCAAGCCCTATGAGATTAGCGTGAAGACCTCAGGC
GACACTGTGGTCGTGGAGGCCAAGCACGAGAAGCGACGTGATGGTGACAC
CTTCGTGGGTCGCCACATCGTCAAGCGGTTCGTCCTGCCCCGAGGATACT
ATCCCAACGATGTGCGATCGGAACTGTCGTCCGATGGCATACTTACCGTC
AAGTGTCCGCCGTATTTGACCAACGAGCGGAGTGTGTACGTCCGCCAAGT
GGGTCCTTCGTATCTAAGCATCAAGAACGCAAGCTTTCTAGACCAT

BO18809.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:38:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG7409-RA 465 CG7409-PA 1..462 17..478 2310 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG7409-RA 760 CG7409-RA 122..583 17..478 2310 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7754530..7754991 17..478 2310 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:38:06 has no hits.

BO18809.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:36:41 Download gff for BO18809.complete
Subject Subject Range Query Range Percent Splice Strand
CG7409-RA 122..583 17..480 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:34 Download gff for BO18809.complete
Subject Subject Range Query Range Percent Splice Strand
CG7409-RA 122..583 17..480 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:50 Download gff for BO18809.complete
Subject Subject Range Query Range Percent Splice Strand
CG7409-RA 122..583 17..480 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:50 Download gff for BO18809.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7754530..7754991 17..480 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:34 Download gff for BO18809.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7747630..7748091 17..480 99   Plus

BO18809.pep Sequence

Translation from 16 to 496

> BO18809.pep
MALVPATNNTDWDYWDYRRRLWRDWDLNDWDLPYWKRSLSRVGSAPDLSR
VIVGKDGFEANVDVHLFKPYEISVKTSGDTVVVEAKHEKRRDGDTFVGRH
IVKRFVLPRGYYPNDVRSELSSDGILTVKCPPYLTNERSVYVRQVGPSYL
SIKNASFLDH

BO18809.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:52:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG7409-PA 154 CG7409-PA 1..154 1..154 838 100 Plus
Hsp27-PB 213 CG4466-PB 73..190 41..153 281 46.6 Plus
Hsp27-PA 213 CG4466-PA 73..190 41..153 281 46.6 Plus
Hsp23-PB 186 CG4463-PB 58..171 43..153 252 46.6 Plus
Hsp23-PA 186 CG4463-PA 58..171 43..153 252 46.6 Plus