BO18830.complete Sequence
547 bp assembled on 2009-05-13
GenBank Submission: KX796613
> BO18830.complete
GAAGTTATCAGTCGACATGTATGCACTCTCCAGTTCTTTGATCCGCTCTC
CGGCGCTGCGCCAGGGCCTCCAGATGGCCGCTGCCAGCCGCCCGGTATCG
ATGAAGGTGGTTTCCGTGGCCGAAACCCAGAAGGACGAGTCGTTCTTCGA
GAAGAACGAGCGCTTGGGCAGGGAGCTGTCGCCCCATCTGACCATCTACC
AACCGCAGCTGACCTCCATGCTCTCGATCTGTCACCGCGGCACAGGATTG
GCCCTGGGTGTGGGTGTTTGGGGTCTGGGATTGGGCGCTCTGATCTCGTC
CCACGACATTAGCCACTATGTGACCATGGTGGAGGGCCTCCAGCTGAGTG
GCGCCACTCTGACCGCCCTCAAGTTTATCATCGCCTATCCGGCTGGCTAT
CACACCGCCAATGGTATTAGGCATCTCCTCTGGGACACCGGACGGTTCCT
GAAGATCAAGGAGGTTTACTCCACCGGTTACGCAATGGTCGCCACCTCTT
TCGTGCTATCCGCTATCTTGGCCCTGCTCGCAAGCTTTCTAGACCAT
BO18830.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:43:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SdhC-RB | 516 | CG6666-PB | 1..513 | 17..529 | 2565 | 100 | Plus |
| SdhC-RA | 516 | CG6666-PA | 1..513 | 17..529 | 2565 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:43:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SdhC-RB | 906 | CG6666-RB | 51..563 | 17..529 | 2565 | 100 | Plus |
| SdhC-RA | 656 | CG6666-RA | 51..563 | 17..529 | 2565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:43:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11209230..11209740 | 529..19 | 2555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:43:51 has no hits.
BO18830.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:42 Download gff for
BO18830.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6666-RA | 51..563 | 17..531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:44:38 Download gff for
BO18830.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SdhC-RA | 51..563 | 17..531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:51:34 Download gff for
BO18830.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SdhC-RA | 51..563 | 17..531 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:51:34 Download gff for
BO18830.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11209228..11209742 | 17..531 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:44:38 Download gff for
BO18830.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7034950..7035464 | 17..531 | 99 | | Minus |
BO18830.pep Sequence
Translation from 16 to 547
> BO18830.pep
MYALSSSLIRSPALRQGLQMAAASRPVSMKVVSVAETQKDESFFEKNERL
GRELSPHLTIYQPQLTSMLSICHRGTGLALGVGVWGLGLGALISSHDISH
YVTMVEGLQLSGATLTALKFIIAYPAGYHTANGIRHLLWDTGRFLKIKEV
YSTGYAMVATSFVLSAILALLASFLDH
BO18830.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SdhC-PB | 171 | CG6666-PB | 1..171 | 1..171 | 857 | 100 | Plus |
| SdhC-PA | 171 | CG6666-PA | 1..171 | 1..171 | 857 | 100 | Plus |
| CG6629-PA | 261 | CG6629-PA | 59..199 | 26..168 | 265 | 41.3 | Plus |
