BO18834.complete Sequence
394 bp assembled on 2009-05-13
GenBank Submission: KX799643
> BO18834.complete
GAAGTTATCAGTCGACATGGCTGCTGCACCCAAGGATATTGAGAAGCCCC
ATGTCGGCGATTCTGCCTCTGTGCACCGCATCCGCATCACCCTGACATCC
AGGAACGTGCGTTCGCTGGAGAATGTGTGCCGCGACCTGATCAACGGTGC
AAAGAACCAGAACTTGCGCGTCAAGGGCCCCGTGCGCATGCCGACCAAGA
CCCTTCGCATCACCACCCGTAAGACTCCTTGTGGTGAGGGTTCCAAGACC
TGGGATCGCTTCCAGATGAGAATCCACAAGCGCATCATCGACTTGCACTC
GCCCTCTGAGATCGTCAAGAAGATTACCTCCATCAACATCGAGCCCGGCG
TAGAGGTTGAGGTCACCATCGCCAACGCAAGCTTTCTAGACCAT
BO18834.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:33:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS20-RA | 363 | CG15693-PA | 1..360 | 17..376 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:33:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS20-RA | 564 | CG15693-RA | 91..450 | 17..376 | 1800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:33:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20822417..20822574 | 19..176 | 790 | 100 | Plus |
3R | 32079331 | 3R | 20823126..20823242 | 260..376 | 585 | 100 | Plus |
3R | 32079331 | 3R | 20822800..20822891 | 174..265 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:33:21 has no hits.
BO18834.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:41 Download gff for
BO18834.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS20-RA | 93..452 | 17..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:56:48 Download gff for
BO18834.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS20-RA | 91..450 | 17..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:27:45 Download gff for
BO18834.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS20-RA | 91..450 | 17..378 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:27:45 Download gff for
BO18834.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20822416..20822573 | 17..175 | 99 | -> | Plus |
3R | 20822802..20822891 | 176..265 | 100 | -> | Plus |
3R | 20823132..20823242 | 266..378 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:56:48 Download gff for
BO18834.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16648138..16648295 | 17..175 | 99 | -> | Plus |
arm_3R | 16648524..16648613 | 176..265 | 100 | -> | Plus |
arm_3R | 16648854..16648964 | 266..378 | 98 | | Plus |
BO18834.pep Sequence
Translation from 16 to 394
> BO18834.pep
MAAAPKDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNL
RVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIV
KKITSINIEPGVEVEVTIANASFLDH
BO18834.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS20-PA | 120 | CG15693-PA | 1..120 | 1..120 | 616 | 100 | Plus |