BO18835.complete Sequence
1516 bp assembled on 2009-08-13
GenBank Submission: KX795586
> BO18835.complete
GAAGTTATCAGTCGACATGTTTCTGGCCAAGAGCATAGTGTGCCTCTCCC
TCCTGGCGGTGGCCAATGCCCAATTCGACACCAACTACGCATCCGGTCGT
AGTGGAATGGTCCACCTCTTCGAGTGGAAGTGGGACGACATCGCTGCCGA
GTGCGAGAACTTCCTGGGACCCAATGGCTACGCCGGTGTTCAGGTCTCCC
CTGTGAACGAGAACGCCGTCAAGGACAGCCGCCCCTGGTGGGAACGTTAC
CAACCCATCTCCTACAAGCTGGAGACCCGCTCCGGAAACGAGGAGCAGTT
CGCCAGCATGGTCAAGCGCTGCAACGCCGTCGGAGTGCGCACCTACGTGG
ACGTGGTCTTCAACCACATGGCCGCCGACGGAGGCACCTACGGCACTGGC
GGCAGCACCGCCAGCCCCAGCAGCAAGAGCTATCCCGGAGTGCCCTACTC
CTCGCTGGACTTCAACCCGACCTGCGCCATCAGCAACTACAACGACGCCA
ACGAGGTGCGCAACTGCGAGCTGGTCGGTCTGCGCGACCTTAACCAGGGC
AACTCCTACGTGCAGGACAAGGTGGTCGAGTTCCTGGACCATCTGATTGA
TCTCGGCGTGGCCGGATTCCGCGTGGACGCCGCCAAACACATGTGGCCCG
CCGACTTGGCCGTCATCTATGGCCGCCTCAAGAACCTGAACACCGACCAC
GGCTTCGCCTCGGGATCCAAGGCGTACATCGTCCAGGAGGTCATCGACAT
GGGCGGCGAGGCCATCAGCAAGTCCGAGTACACCGGACTGGGCGCCATCA
CCGAGTTCCGCCACTCCGACTCCATCGGCAAGGTCTTCCGCGGCAAGGAC
CAGCTGCAGTATCTGACCAACTGGGGCACCGCCTGGGGCTTCGCCGCCTC
CGACCGCTCCCTGGTATTCGTCGACAACCACGACAACCAGCGCGGACATG
GAGCAGGAGGCGCCGACGTGCTGACCTACAAGGTGCCCAAGCAGTACAAG
ATGGCCTCCGCCTTCATGCTGGCGCACCCATTCGGCACTCCCCGCGTGAT
GTCCTCCTTCTCCTTCACGGACACCGATCAGGGCCCGCCCACCACCGACG
GCCACAACATCGCCTCGCCCATCTTCAATAGCGACAACTCCTGCAGCGGC
GGCTGGGTGTGCGAGCACCGCTGGCGCCAGATCTACAACATGGTGGCCTT
CCGGAACGCCGTGGGATTGGACGAGATCCAGAACTGGTGGGACAGCGGCA
GCAATCAGATCTCCTTCAGCCGAGGTAGCCGCGGCTTCGTGGCCTTCAAC
AACGACAACTACGACCTGAACAGCTCCCTGCAGACGGGCCTGCCCGCCGG
CACCTACTGCGACGTCATTTCCGGCTCCAAGAGCGGCTCCTCCTGCACGG
GCAAGACGGTCACCGTCGGATCCGACGGACGGGCTTCCATCTACATTGGC
AGCTCCGAGGACGACGGAGTGCTGGCCATTCACGTCAACGCCAAGTTGGC
AAGCTTTCTAGACCAT
BO18835.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:33:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Amy-d-RA | 1485 | CG17876-PA | 1..1482 | 17..1498 | 7350 | 99.7 | Plus |
| Amy-p-RB | 1485 | CG18730-PB | 1..1482 | 17..1498 | 7095 | 98.6 | Plus |
| Amy-p-RA | 1485 | CG18730-PA | 1..1482 | 17..1498 | 7095 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:33:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Amy-d-RA | 1606 | CG17876-RA | 36..1518 | 16..1498 | 7355 | 99.7 | Plus |
| Amy-p-RB | 1668 | CG18730-RB | 33..1515 | 16..1498 | 7100 | 98.6 | Plus |
| Amy-p-RA | 1595 | CG18730-RA | 33..1515 | 16..1498 | 7100 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:33:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17124799..17126281 | 16..1498 | 7355 | 99.7 | Plus |
| 2R | 25286936 | 2R | 17118789..17120271 | 1498..16 | 7100 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:33:17 has no hits.
BO18835.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-13 17:08:14 Download gff for
BO18835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-d-RA | 45..1520 | 23..1500 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:01:52 Download gff for
BO18835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-d-RA | 45..1520 | 23..1500 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:04:14 Download gff for
BO18835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-d-RA | 43..1518 | 23..1500 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:04:14 Download gff for
BO18835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17124806..17126281 | 23..1500 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:01:52 Download gff for
BO18835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13012311..13013786 | 23..1500 | 99 | | Plus |
BO18835.pep Sequence
Translation from 16 to 1516
> BO18835.pep
MFLAKSIVCLSLLAVANAQFDTNYASGRSGMVHLFEWKWDDIAAECENFL
GPNGYAGVQVSPVNENAVKDSRPWWERYQPISYKLETRSGNEEQFASMVK
RCNAVGVRTYVDVVFNHMAADGGTYGTGGSTASPSSKSYPGVPYSSLDFN
PTCAISNYNDANEVRNCELVGLRDLNQGNSYVQDKVVEFLDHLIDLGVAG
FRVDAAKHMWPADLAVIYGRLKNLNTDHGFASGSKAYIVQEVIDMGGEAI
SKSEYTGLGAITEFRHSDSIGKVFRGKDQLQYLTNWGTAWGFAASDRSLV
FVDNHDNQRGHGAGGADVLTYKVPKQYKMASAFMLAHPFGTPRVMSSFSF
TDTDQGPPTTDGHNIASPIFNSDNSCSGGWVCEHRWRQIYNMVAFRNAVG
LDEIQNWWDSGSNQISFSRGSRGFVAFNNDNYDLNSSLQTGLPAGTYCDV
ISGSKSGSSCTGKTVTVGSDGRASIYIGSSEDDGVLAIHVNAKLASFLDH
BO18835.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:37:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Amy-d-PA | 494 | CG17876-PA | 1..494 | 1..494 | 2641 | 100 | Plus |
| Amy-p-PB | 494 | CG18730-PB | 1..494 | 1..494 | 2631 | 99.4 | Plus |
| Amy-p-PA | 494 | CG18730-PA | 1..494 | 1..494 | 2631 | 99.4 | Plus |
| Amyrel-PA | 493 | CG8221-PA | 19..493 | 18..494 | 1579 | 61.2 | Plus |
