BO18837.complete Sequence
718 bp assembled on 2009-05-13
GenBank Submission: KX795105
> BO18837.complete
GAAGTTATCAGTGGACATGTCCTTTCTTTCGCCCACACTGCGCCTGGAGA
ATCTGTCCACGCAGCCCACGATGACGCAGGATCATGTGCCCGAGGACCAG
CGCTATAACAAACAGAATATTGTGGCTCAATGGTGTGTGCCCATCAATGG
CAAGATGTACCGCATCGAGCTGGAACATGGCACAACCAGTGGGCGGCGCA
TGATTTGGGTCAATGGACGGGAAGTCCTGCGTCGCGACTGGATGTTCAAA
CTGGTTGGCGAAGACACCTTTCACATCGATCAGACGCGCTGCATCATACG
CGTTGATCCTGCGCCGGGCTTCAAATACGAGTACTCCCTCTACATCGACG
GCAAATCGCACGACCAGTACACCGAGGACATGACACGGCAATATCGACTG
TGGCTATATACGGATGATGCGGCCGCCGATGCGCCGCAGGAATATAGAAT
AATGCTCAAACTGGACACGCTGAGTCTCTACGTAAACGATGAGCTGCGCA
CCGAGGAGTCGGTTTTTGTTCACGGCGGCACAGACACCAAGTTCCTGCTG
CAGGACACGGAATTCGTGCTTCAGGCACGCTCAAGTGGCAATAAACATGA
TGGCATCGTTCACACTCTGCTGGCGAATGGGGTGGCAGTTCCGGAGGCGA
AGATTCAGGAGATTATGCAAGAGCCGGTCTCCATTTTGCAGAGCAGCAAC
GCAAGCTTTCTAGACCAT
BO18837.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:35:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10257-RA | 687 | CG10257-PA | 1..684 | 17..700 | 3420 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:35:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10257-RA | 1377 | CG10257-RA | 554..1238 | 16..700 | 3425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:34:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14943770..14944058 | 220..508 | 1445 | 100 | Plus |
| 2R | 25286936 | 2R | 14944137..14944330 | 507..700 | 970 | 100 | Plus |
| 2R | 25286936 | 2R | 14942951..14943089 | 16..154 | 695 | 100 | Plus |
| 2R | 25286936 | 2R | 14943197..14943265 | 153..221 | 345 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:35:00 has no hits.
BO18837.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:29 Download gff for
BO18837.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10257-RA | 342..1025 | 17..702 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:02:46 Download gff for
BO18837.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10257-RA | 555..1238 | 17..702 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:04:59 Download gff for
BO18837.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10257-RA | 555..1238 | 17..702 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:04:59 Download gff for
BO18837.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14942952..14943089 | 17..154 | 100 | -> | Plus |
| 2R | 14943199..14943264 | 155..220 | 100 | -> | Plus |
| 2R | 14943771..14944058 | 221..508 | 100 | -> | Plus |
| 2R | 14944139..14944330 | 509..702 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:02:46 Download gff for
BO18837.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10830457..10830594 | 17..154 | 100 | -> | Plus |
| arm_2R | 10830704..10830769 | 155..220 | 100 | -> | Plus |
| arm_2R | 10831276..10831563 | 221..508 | 100 | -> | Plus |
| arm_2R | 10831644..10831835 | 509..702 | 98 | | Plus |
BO18837.pep Sequence
Translation from 16 to 718
> BO18837.pep
MSFLSPTLRLENLSTQPTMTQDHVPEDQRYNKQNIVAQWCVPINGKMYRI
ELEHGTTSGRRMIWVNGREVLRRDWMFKLVGEDTFHIDQTRCIIRVDPAP
GFKYEYSLYIDGKSHDQYTEDMTRQYRLWLYTDDAAADAPQEYRIMLKLD
TLSLYVNDELRTEESVFVHGGTDTKFLLQDTEFVLQARSSGNKHDGIVHT
LLANGVAVPEAKIQEIMQEPVSILQSSNASFLDH
BO18837.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:54:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10257-PA | 228 | CG10257-PA | 1..228 | 1..228 | 1204 | 100 | Plus |
