BO18866.complete Sequence
745 bp assembled on 2009-05-13
GenBank Submission: KX794787
> BO18866.complete
GAAGTTATCAGTCGACATGGCTCAGGTTAAACCGAAAAGTAACAAACAGA
GCGGCAAACCAGTGCCGGCCGCCAAAAAGAGCGTCCAAGAGAAGAGCAGC
GCGCAGCAGAAGAAGAACAAACAGAAGGCCGCGGCAGAAAAAAAGAAATG
CGGATGCTGCAAGTGGACCTTGGGTAGCATCTTCATCATCGCCCTGATTG
CCGGAGCTCTGTACTACGATACCGAGGTGAACGGCAAGGGCGTGTTCGAG
AAATCGGCCACCGGCAAGGTGCTGAAAAATGCCGGAGTCCTGCCGCATGT
CCAGAAGTCCTGGTACACGGTCATGGGGGCCGGAGCGCGGGGCTACAAGT
GGGCGGAAGTGAATGTGCCGCCGTACGCCGAGCCGGTGATCAAGACCACC
TGTGACCTGTGGAAGCTGGCGAGGAATGCGGCCTGCAACGCTTACCAGAA
CGGCAAGGGATACTTTGGCGCCAAATGGCCCGTTGTGGCAAAGTTCATTG
ACCAATACGTGCCCAATTCGTCTGGCAAAATCGAAGCTTTTGCCGCTGGC
GTTAGCGATTTAGCCGCCAGCAGCTATGAAAAGGCTGCAGCGCTCATCAA
GGAAAAGGTGCTTGTTGGCCGTCTCTCGCCCGAGAACATCAATCAGGCGC
TGAACCAGACGCGTAACGCCGCCCTGGAGTACTACAACCAGTTTCACAAA
AAGGTCGACGCATACGCCAAGCTCAAAGCAAGCTTTCTAGACCAT
BO18866.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:24:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33129-RH | 714 | CG33129-PH | 1..711 | 17..727 | 3555 | 100 | Plus |
| CG33129-RG | 714 | CG33129-PG | 1..711 | 17..727 | 3555 | 100 | Plus |
| CG33129-RC | 714 | CG33129-PC | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:24:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33129-RH | 1661 | CG33129-RH | 248..958 | 17..727 | 3555 | 100 | Plus |
| CG33129-RG | 1782 | CG33129-RG | 369..1079 | 17..727 | 3555 | 100 | Plus |
| CG33129-RC | 1473 | CG33129-RC | 60..770 | 17..727 | 3555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:24:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10965993..10966411 | 496..78 | 2095 | 100 | Minus |
| 2L | 23513712 | 2L | 10965792..10965910 | 615..497 | 595 | 100 | Minus |
| 2L | 23513712 | 2L | 10965608..10965719 | 727..616 | 560 | 100 | Minus |
| 2L | 23513712 | 2L | 10966502..10966564 | 79..17 | 315 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:24:20 has no hits.
BO18866.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:38 Download gff for
BO18866.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33129-RC | 109..819 | 17..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:28 Download gff for
BO18866.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33129-RC | 60..770 | 17..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:40:35 Download gff for
BO18866.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33129-RC | 60..770 | 17..729 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:40:35 Download gff for
BO18866.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10965605..10965719 | 616..729 | 98 | <- | Minus |
| 2L | 10965792..10965910 | 497..615 | 100 | <- | Minus |
| 2L | 10965993..10966409 | 80..496 | 100 | <- | Minus |
| 2L | 10966502..10966564 | 17..79 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:28 Download gff for
BO18866.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10965605..10965719 | 616..729 | 98 | <- | Minus |
| arm_2L | 10965792..10965910 | 497..615 | 100 | <- | Minus |
| arm_2L | 10965993..10966409 | 80..496 | 100 | <- | Minus |
| arm_2L | 10966502..10966564 | 17..79 | 100 | | Minus |
BO18866.pep Sequence
Translation from 16 to 745
> BO18866.pep
MAQVKPKSNKQSGKPVPAAKKSVQEKSSAQQKKNKQKAAAEKKKCGCCKW
TLGSIFIIALIAGALYYDTEVNGKGVFEKSATGKVLKNAGVLPHVQKSWY
TVMGAGARGYKWAEVNVPPYAEPVIKTTCDLWKLARNAACNAYQNGKGYF
GAKWPVVAKFIDQYVPNSSGKIEAFAAGVSDLAASSYEKAAALIKEKVLV
GRLSPENINQALNQTRNAALEYYNQFHKKVDAYAKLKASFLDH
BO18866.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33129-PH | 237 | CG33129-PH | 1..237 | 1..237 | 1236 | 100 | Plus |
| CG33129-PG | 237 | CG33129-PG | 1..237 | 1..237 | 1236 | 100 | Plus |
| CG33129-PC | 237 | CG33129-PC | 1..237 | 1..237 | 1236 | 100 | Plus |
| CG33129-PB | 237 | CG33129-PB | 1..237 | 1..237 | 1236 | 100 | Plus |
| CG33129-PA | 237 | CG33129-PA | 1..237 | 1..237 | 1236 | 100 | Plus |
