BO18869.complete Sequence
931 bp assembled on 2009-05-13
GenBank Submission: KX797221
> BO18869.complete
GAAGTTATCAGTCGACATGGAAGCAGATCAAGCAGCAAGCAAGGAAGCCG
AATCATGCATCGACCTCTTGGTGATCGTCCTGGACACGAACCCCTCCCAG
CACTTCGTGCGCCAGAACCCACAGAACCTCACGCAAATCCTGGAGGCGGT
GATTGCCTTTGGGAATGCTCACCTGATGCAGAAGGCCCAGAACAAACTGG
CTGTGGTATCCTGCTCCCACCATGCCACAAACTTCCTGTATCCGCTGCCC
AGAAGACAAGTGGAACTGCGCCAAGTGGATGGGCAGTACGAGGCGTTTAA
TCTGGTGGAGAAGACGGTGAAGCAGCAGCTGGGCAGCATCCTGATGAACG
CACCACGGCTCAGCGCTCCTTGTGAGAGTCTCCTGGCCGGCAGCATGTCC
ATGGCGCTGTGCTACATATCAAGGCTCCAGAGGAATCTGGCTCCTGGCGT
CAAGATGCATTCCCGCATCCTGGTCGTCACAGGCAGCAACGAGTGCGCCT
CGCAGTACATGACGTTCATGAACGTCTTCTTCACCGCCCAGAAACTGGGC
ATCACGATCGATACCTGCGCCCTGGACAAGACCCTCAGTTTGCTACAGCA
AGGCTGTGACATTACCTCCGGACAGTTCCTCAAGGTCACCCAGCTGGACG
GCCTGCTGCAGTACCTCCTGTGGGTCTTCCTGCCCGCCCCGCAGATCCGT
CACAAATTGGTCCTGCCGCCACCGCCCAAAGTGGACTACCGCGCCTCCTG
CTTCTGCCATCGTGAGCTGATCGACATTGGCTACGTCTGCTCGGTTTGCC
TCTCGGTCTTCTGCAAATACAGTCCCATATGCACCACTTGCCACACCATT
TTCAAGAATCCCGGTCCTCTGCCCATCAAGGGCAAAAAGAAAAAGAAGAC
CGACAAGCAAATGGCAAGCTTTCTAGACCAT
BO18869.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:44:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tfb4-RA | 900 | CG5041-PA | 1..897 | 17..913 | 4485 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:44:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tfb4-RA | 999 | CG5041-RA | 31..927 | 17..913 | 4485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:44:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1149651..1150070 | 843..424 | 2100 | 100 | Minus |
| 2L | 23513712 | 2L | 1150131..1150326 | 424..229 | 980 | 100 | Minus |
| 2L | 23513712 | 2L | 1150379..1150561 | 228..46 | 915 | 100 | Minus |
| 2L | 23513712 | 2L | 1149517..1149586 | 913..844 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:44:03 has no hits.
BO18869.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:36:33 Download gff for
BO18869.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tfb4-RA | 27..923 | 17..915 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:27 Download gff for
BO18869.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tfb4-RA | 31..927 | 17..915 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:15:12 Download gff for
BO18869.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tfb4-RA | 31..927 | 17..915 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:15:12 Download gff for
BO18869.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1150379..1150559 | 48..228 | 100 | <- | Minus |
| 2L | 1150617..1150647 | 17..47 | 100 | | Minus |
| 2L | 1149515..1149586 | 844..915 | 97 | <- | Minus |
| 2L | 1149651..1150069 | 425..843 | 100 | <- | Minus |
| 2L | 1150131..1150326 | 229..424 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:27 Download gff for
BO18869.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1149651..1150069 | 425..843 | 100 | <- | Minus |
| arm_2L | 1149515..1149586 | 844..915 | 97 | <- | Minus |
| arm_2L | 1150131..1150326 | 229..424 | 100 | <- | Minus |
| arm_2L | 1150379..1150559 | 48..228 | 100 | <- | Minus |
| arm_2L | 1150617..1150647 | 17..47 | 100 | | Minus |
BO18869.pep Sequence
Translation from 16 to 931
> BO18869.pep
MEADQAASKEAESCIDLLVIVLDTNPSQHFVRQNPQNLTQILEAVIAFGN
AHLMQKAQNKLAVVSCSHHATNFLYPLPRRQVELRQVDGQYEAFNLVEKT
VKQQLGSILMNAPRLSAPCESLLAGSMSMALCYISRLQRNLAPGVKMHSR
ILVVTGSNECASQYMTFMNVFFTAQKLGITIDTCALDKTLSLLQQGCDIT
SGQFLKVTQLDGLLQYLLWVFLPAPQIRHKLVLPPPPKVDYRASCFCHRE
LIDIGYVCSVCLSVFCKYSPICTTCHTIFKNPGPLPIKGKKKKKTDKQMA
SFLDH
BO18869.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:52:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tfb4-PA | 299 | CG5041-PA | 1..299 | 1..299 | 1564 | 100 | Plus |
