BO18886.complete Sequence
1168 bp assembled on 2009-05-13
GenBank Submission: KX795335
> BO18886.complete
GAAGTTATCAGTCGACATGGCCCGCCGAACACAATCGCGTTATATCTTTG
ACATCGAGGATAACTTCCGTGTGTTTCGCCACCAGTTTTTCGTCAACGGT
GCAAGGAGAGCGGATTGCACAACCTGTGAAAGTCGAGTGCCAGTCAGCGA
ACCATACCATCATCATTGGCGAAATGATATCGAGAACAATAGAAGCCATT
GCATTCAAATTGGTTCTGATGAAAAGGATATCCTGAAGAGGATCGAGGAC
CAGGCCATCGAAGAGTTTATCTTGTGTGATGGAAGCATTGCGGCCAGGAC
CAACGACTTTCTTCTGGATGCTGGGATGGATGCAGTTCCGCAACTGCTGC
GATTTTTAAGTTTTGGTACAGAAAAATTGGAGACCACAGTTGGATTTTAC
GTGGATGTGAAAAAGGAGCGAATGTACTACGAAAGCAGTCCGTTAAATAT
CGAAAACCATTTCGATATTGGTGAGGCGGTGGACATGATATTCTCCATGC
TGCTGGAGAAGATCAGCAACTACGTGCTGCTCCATCAGAAGGTTCCACTG
GAGGCGTGTGTCATCAGAAGGATGAAGGTGACGGTCAAGAGATTTTGCGT
CTCGCCTAAGAGCAATTCTCTTAAACTTCCTTTGCAGTACCGAGTAAAAA
ACGCAACAGAAGTCATTGGAAATGGAAGTAATAAGCATTCCTCCGATTTA
GCACAACTTTCTGAAACTTATATAAACCAAAAGGACCAAAATCAACACAT
TCCGGCAACTCTAAAAATAAACCTGTACACTTTTCGGGTCTGCAGCACTT
CCAAGGAATTATTTGCAGTACCATATTTGCTCCGAGGCGATGATGTCGAA
AACACACCCACCTTCATCATTCAAACGGACGTAGTTGGTGACTTTCGGGG
CTTACTTGAGATCCGAAACATAAGAAAGTTCCTGCGCGTGGATACCCACG
ATCGAGTGTTCGAGTGCCGCCAGTGTCAATCCCACTTTGTGGACCGGGTG
CACCTGGCGCTCCACAAACAAATCGCCTGTGGCAGGAACTTTATGGTGTG
GCACATGGACAAGGACGCCATCGAGTTGCACGAGAATTGCCTGCCTCTGC
CAAAGGAGTACTTCAAATATGAATGGGTCGGATTGGCAAGCAAGCGAATT
GCAAGCTTTCTAGACCAT
BO18886.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:09:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6885-RA | 1137 | CG6885-PA | 1..1134 | 17..1150 | 5670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:09:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6885-RA | 1212 | CG6885-RA | 21..1155 | 16..1150 | 5675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:09:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18744508..18745642 | 16..1150 | 5675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:09:24 has no hits.
BO18886.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:36:44 Download gff for
BO18886.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6885-RA | 16..1149 | 17..1152 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:18:54 Download gff for
BO18886.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6885-RA | 22..1155 | 17..1152 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:10 Download gff for
BO18886.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6885-RA | 22..1155 | 17..1152 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:10 Download gff for
BO18886.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18744509..18745642 | 17..1152 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:18:54 Download gff for
BO18886.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18737609..18738742 | 17..1152 | 99 | | Plus |
BO18886.pep Sequence
Translation from 16 to 1168
> BO18886.pep
MARRTQSRYIFDIEDNFRVFRHQFFVNGARRADCTTCESRVPVSEPYHHH
WRNDIENNRSHCIQIGSDEKDILKRIEDQAIEEFILCDGSIAARTNDFLL
DAGMDAVPQLLRFLSFGTEKLETTVGFYVDVKKERMYYESSPLNIENHFD
IGEAVDMIFSMLLEKISNYVLLHQKVPLEACVIRRMKVTVKRFCVSPKSN
SLKLPLQYRVKNATEVIGNGSNKHSSDLAQLSETYINQKDQNQHIPATLK
INLYTFRVCSTSKELFAVPYLLRGDDVENTPTFIIQTDVVGDFRGLLEIR
NIRKFLRVDTHDRVFECRQCQSHFVDRVHLALHKQIACGRNFMVWHMDKD
AIELHENCLPLPKEYFKYEWVGLASKRIASFLDH
BO18886.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:52:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6885-PA | 378 | CG6885-PA | 1..378 | 1..378 | 1999 | 100 | Plus |
CG7271-PA | 427 | CG7271-PA | 7..384 | 7..377 | 470 | 27.9 | Plus |
term-PA | 428 | CG4216-PA | 8..385 | 7..377 | 467 | 27.9 | Plus |