BO18888.complete Sequence
994 bp assembled on 2009-05-13
GenBank Submission: KX799303
> BO18888.complete
GAAGTTATCAGTCGACATGGACGACCAGGCGTGCCCGCGGTGCAAGACCA
CCAAATACCGGAATCCATCGCTCAAGCTGATGGTCAACGTTTGCGGACAC
ACATTATGCGAATCTTGCGTGGACTTGCTGTTCCTCAAAGGATCCGGCGC
CTGTCCAGAGTGCATGGTCCCATTGCGGCGCAACAACTTCCGCGTGCAGC
TTTTTGAGGACCCAATGGTGGAGAAGGAGGTGGATATTCGTAGGCGAATT
CTGCGCGACTACAATAAACGTGAGGAGGACTTTGCCTCCCTGGCGGAGTA
CAATGACTATCTGGAGGAGATCGAGGACATTGTGTACAATCTGTGCAACA
ACATCGACATCATCGAGACAAACAAGCGTATTGAGGCCTACAAGCGTGAT
AACCGTGAGGTCATTCAGCGGAATAAAACCCGCGTGGGACGCGATGAGTA
CGCGTTGGAGGAGATGCTGGAGCTGGAGAAAGTTCAGGAGGAGGCGCGTA
GGAAGGAGCTGGAGGAACTGGAGAACGAGCACAAGAAGAAGAAGGCCCGC
GACAAGCAGGCGCTGATCGAGGAGCTGATGTACAGCGGCAAGGATGCCGC
CCAAATTGTCACCGAGTTCGCCGAAAAAGCGGAAAAGCAGCGCGAGGAGG
AGAAACAGCTTCCACCGCCGAAGCCCGCCAACGAGTTCTCTACGGGCATA
AAGTTCGGACAGACAGCTGATCCCAGTCTGCTGCCCGTTCCCAAATCGGA
GGAGGGTCCACTTTTCGTATACGAGCCACTTGTTCCTTTCAGTGAGGGAC
CTGCCATGCCGCCCACAAATGAGATCGTGTCCAGGGGCTATATTGCCCAC
ATACGAGCTGAAACACCGCAGGAGAACGCCGGCGGATTCACATCCGCTCT
GGCTTGTGAACGGGCGCTTCAGGAGGCGCTGCAGGGACTCTACTATACGG
CTACAACGGGTGTGGTATCTGGCACCGCAAGCTTTCTAGACCAT
BO18888.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:30:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mat1-RA | 963 | CG7614-PA | 1..960 | 17..976 | 4800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:30:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mat1-RA | 1213 | CG7614-RA | 110..1069 | 17..976 | 4800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:30:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10738761..10739720 | 976..17 | 4800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:30:11 has no hits.
BO18888.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:36 Download gff for
BO18888.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mat1-RA | 115..1074 | 17..978 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:16:40 Download gff for
BO18888.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mat1-RA | 110..1069 | 17..978 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:12:00 Download gff for
BO18888.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mat1-RA | 110..1069 | 17..978 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:12:00 Download gff for
BO18888.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10738757..10739720 | 17..978 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:16:40 Download gff for
BO18888.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6626262..6627225 | 17..978 | 99 | | Minus |
BO18888.pep Sequence
Translation from 16 to 994
> BO18888.pep
MDDQACPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFLKGSGACPECM
VPLRRNNFRVQLFEDPMVEKEVDIRRRILRDYNKREEDFASLAEYNDYLE
EIEDIVYNLCNNIDIIETNKRIEAYKRDNREVIQRNKTRVGRDEYALEEM
LELEKVQEEARRKELEELENEHKKKKARDKQALIEELMYSGKDAAQIVTE
FAEKAEKQREEEKQLPPPKPANEFSTGIKFGQTADPSLLPVPKSEEGPLF
VYEPLVPFSEGPAMPPTNEIVSRGYIAHIRAETPQENAGGFTSALACERA
LQEALQGLYYTATTGVVSGTASFLDH
BO18888.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:54:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mat1-PA | 320 | CG7614-PA | 1..320 | 1..320 | 1666 | 100 | Plus |