Clone BO18893 Report

Search the DGRC for BO18893

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:188
Well:93
Vector:pDNR-Dual
Associated Gene/TranscriptAda-RA
Protein status:BO18893.pep: Imported from assembly
Sequenced Size:1045

Clone Sequence Records

BO18893.complete Sequence

1045 bp assembled on 2009-05-13

GenBank Submission: KX798026

> BO18893.complete
GAAGTTATCAGTCGACATGGAGCAGTTTCTTAAAGGTCTGCCCAAAGTAG
AGCTCCATGCTCACCTCAACGGTTCCTTGGGCATCAAAAGCCTATGTGAT
CTTGGCGAGCGATTGTATGGAACCTCTTGTAAAGATTTCCTGAAGTTGTG
CGCGCACTTCAGCCGATTTGAAAAGGATATGGATGCATGCTTCGAGAAGT
TTGCATTTGTGCACGAGTTGACCTCCACCCGGGAGGGTCTGCGATTTGCC
ACGGAGTTGGCGATTCGAGATTTCGCTGAGGACAACGTCCAGTATGTGGA
AATGAGGACCACTCCTAAGGCAAACGAGAACTATTCACGCAGGGACTACC
TGCAGATCGTGATCGATGCAATTAAGGCAGCTAGCGAAACGTATCCAGAG
ATAACAGTCAAGCTACTGCCCTCCATCAATCGAGCGGAACCAGTGGACGT
GGCTGAGGAAACAGTTTCCCTGGCTGTGGAGTTGGCACGGGCTCATCCAA
ATCTTATCTTAGGCATCGATCTTAGCGGTAATCCAGGGAAGGGGCGGTTT
TCCGACTTTGCTCCTATTCTTGCACAGGCCCGGGATAAGGGTCTGAAGTT
AGCTATACACTGCGCCGAGATCGAGAATCCATCGGAGGTAAAGGAAATGC
TGCACTTTGGAATGTCCCGCTGTGGACATGGAACTTTTCTTACTCCCGAG
GACATTGGGCAGCTTAAACAACGAAATATTGCCATTGAATGCTGCCTCAC
TAGTAATGTTAAGTCGGGAACAGTGCCCAGCTTGGAGGAGCACCACTTGA
AAAGAATCATGGAGGCAGATGCACCCAAGGTTATCTGCACGGACGACAGT
GGCGTTTTTGATACCACTTTGACAAAGGAGTTTCTGATTGCTGCGGAAAC
TTTCGGTCTAACCCGTGAACAATGCATCGATTTGACCTTGGAGGCAGTGC
ATCATTCATTCGCCAGCGAACAGGAGCAAATACAGATGGCGGATAGGGTG
GGGAACTACGCAGACATATTGGTCAAAGCAAGCTTTCTAGACCAT

BO18893.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:54:40
Subject Length Description Subject Range Query Range Score Percent Strand
Ada-RA 1014 CG11994-PA 1..1011 17..1027 5055 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:54:41
Subject Length Description Subject Range Query Range Score Percent Strand
Ada-RA 1121 CG11994-RA 57..1067 17..1027 5055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:54:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9065239..9066249 17..1027 5055 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:54:39 has no hits.

BO18893.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:36:39 Download gff for BO18893.complete
Subject Subject Range Query Range Percent Splice Strand
Ada-RA 61..1071 17..1029 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:24 Download gff for BO18893.complete
Subject Subject Range Query Range Percent Splice Strand
Ada-RA 57..1067 17..1029 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:29:30 Download gff for BO18893.complete
Subject Subject Range Query Range Percent Splice Strand
Ada-RA 57..1067 17..1029 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:29:30 Download gff for BO18893.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9065239..9066249 17..1029 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:24 Download gff for BO18893.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4890961..4891971 17..1029 99   Plus

BO18893.pep Sequence

Translation from 16 to 1045

> BO18893.pep
MEQFLKGLPKVELHAHLNGSLGIKSLCDLGERLYGTSCKDFLKLCAHFSR
FEKDMDACFEKFAFVHELTSTREGLRFATELAIRDFAEDNVQYVEMRTTP
KANENYSRRDYLQIVIDAIKAASETYPEITVKLLPSINRAEPVDVAEETV
SLAVELARAHPNLILGIDLSGNPGKGRFSDFAPILAQARDKGLKLAIHCA
EIENPSEVKEMLHFGMSRCGHGTFLTPEDIGQLKQRNIAIECCLTSNVKS
GTVPSLEEHHLKRIMEADAPKVICTDDSGVFDTTLTKEFLIAAETFGLTR
EQCIDLTLEAVHHSFASEQEQIQMADRVGNYADILVKASFLDH

BO18893.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:52:39
Subject Length Description Subject Range Query Range Score Percent Strand
Ada-PA 337 CG11994-PA 1..337 1..337 1740 100 Plus
Adgf-B-PA 520 CG5998-PA 240..448 82..277 156 29 Plus