BO18916.complete Sequence
343 bp assembled on 2010-10-06
GenBank Submission: KX798675
> BO18916.complete
GAAGTTATCAGTCGACATGACGCTCACCTACTGGATCGGCATGATCATCG
GTCCGCCTAGAACACCATTCGAGAATCGAATGTATTCACTAAAGATCGAG
TGCGGCGAACGCTATCCGGATGAGCCACCAACGCTCCGGTTTATAACTAA
AGTAAACATTAACTGCATTAATCAGAACAATGGCGTGGTTGATCATAGAT
CAGTTCAGATGTTGGCCAGATGGAGTCGCGAGTACAATATAAAAACGATG
CTGCAGGAAATCCGTAGGATTATGACCATGAAAGAGAACCTGAAGCTGGC
ACAGCCGCCAGAAGGTAGCTGTTTTGCAAGCTTTCTAGACCAT
BO18916.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:33:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Uev1A-RC | 438 | CG10640-PC | 123..435 | 13..325 | 1565 | 100 | Plus |
| Uev1A-RA | 438 | CG10640-PA | 123..435 | 13..325 | 1565 | 100 | Plus |
| Uev1A-RB | 312 | CG10640-PB | 1..309 | 17..325 | 1545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:33:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Uev1A-RC | 1189 | CG10640-RC | 149..461 | 13..325 | 1565 | 100 | Plus |
| Uev1A-RB | 1609 | CG10640-RB | 303..615 | 13..325 | 1565 | 100 | Plus |
| Uev1A-RA | 1196 | CG10640-RA | 192..504 | 13..325 | 1565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:33:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5363878..5364016 | 325..187 | 695 | 100 | Minus |
| 3L | 28110227 | 3L | 5364082..5364209 | 189..62 | 640 | 100 | Minus |
| 3L | 28110227 | 3L | 5364943..5364991 | 61..13 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:33:27 has no hits.
BO18916.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-06 18:32:05 Download gff for
BO18916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Uev1A-RA | 196..504 | 17..327 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:47 Download gff for
BO18916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Uev1A-RA | 196..504 | 17..327 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:13:42 Download gff for
BO18916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Uev1A-RA | 196..504 | 17..327 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:13:42 Download gff for
BO18916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5364084..5364209 | 62..187 | 100 | <- | Minus |
| 3L | 5364943..5364987 | 17..61 | 100 | | Minus |
| 3L | 5363876..5364015 | 188..327 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:47 Download gff for
BO18916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5358043..5358087 | 17..61 | 100 | | Minus |
| arm_3L | 5356976..5357115 | 188..327 | 98 | <- | Minus |
| arm_3L | 5357184..5357309 | 62..187 | 100 | <- | Minus |
BO18916.pep Sequence
Translation from 16 to 343
> BO18916.pep
MTLTYWIGMIIGPPRTPFENRMYSLKIECGERYPDEPPTLRFITKVNINC
INQNNGVVDHRSVQMLARWSREYNIKTMLQEIRRIMTMKENLKLAQPPEG
SCFASFLDH
BO18916.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:06:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Uev1A-PB | 103 | CG10640-PB | 1..103 | 1..103 | 557 | 100 | Plus |
| Uev1A-PC | 145 | CG10640-PC | 43..145 | 1..103 | 557 | 100 | Plus |
| Uev1A-PA | 145 | CG10640-PA | 43..145 | 1..103 | 557 | 100 | Plus |
| Ubc6-PC | 151 | CG2013-PC | 36..114 | 6..87 | 136 | 34.9 | Plus |
| Ubc6-PA | 151 | CG2013-PA | 36..114 | 6..87 | 136 | 34.9 | Plus |
