BO18936.complete Sequence
1108 bp assembled on 2011-03-18
GenBank Submission: KX796458
> BO18936.complete
GAAGTTATCAGTCGACATGAAATTTAAACAAATGGACTTTGTGACGACAA
CTGGGGAGGGAAGTTTTCTGCGAAACAAGATTCGTGCATATGCCAAGGAT
CACCGTGTTGAGTGCCGCATAAAGGCGAAAGACTCATTGCGCATTGGACT
TGGACAGGTTAAGCAGGAAGTGGCGGCTCTTGAGATGGGCACCAAGGACG
TCATTGGAATGGCCAGCAGGATCAAGCGTCGCAAGCACGCCACCTCCGAG
GATCTGTGCCGCTTGTCGCTGGGGTTCCTCCAGAGCAATGACAACATCAA
TGCATTCGCAGCTATTCCTGGCGCCATTCAGGTTCTGGTTAAGGAGCTAA
CTGGACCTCACATTCAACGACAGACAGATGCCGTGGAGTGCTTGTGTAAT
CTTTCCTTGGGCGAGGCCCATGTCTCCGAAAAGATTGTCACTTTGGCGGG
CAGCTACATGGTCACCTACCTTGATGGCAAGGCCGAACGCCTCAAGCGCA
GTTGCCTGTGGACACTGGCCAACGTTCTGGGCACATGCGACAAGGCCGGC
AGCGTATTGCTGCAAATGCAAATAGTACCCAAGCTGTGGAGGCTCTACAT
CGAGCCCAATGGCTGCCAAGAAGATGCGGCCATCTGCCTCTCCCTGGTGG
CCACCCGCTGCCCGCAGCATGTGAGTGACGAGGATCGAAGGTACATTGGC
CAGAATCTGCCTGAGAAGCTCCACGGCCAGCCTGCCAGCGAGTACTTCAT
GTACATAGTGCACCAACTGGAAATAGTGACACAGGAGCACAAGTTAGATG
CTCAACAGGCCGAATGCCTGGTGCGTTTCTTTGAAGCCACCTTAGCATCG
CCAGCCGACCGGCTGTGCCTAATCTACGCCGTGCGTGTAATGACCAATCT
GGTAGCCCTAGGTGACACAAGTCTAATATTCGCACTGGCAGACCCGCAGA
ATCTTGTGCAAACCCTAAACCAGCTCTTCGCTCTGCGAGATCCAGATCTC
AACCTGGACGCGATGCGCTTGCTCAAGAACTGTCTGCACTTGAAGGTAGC
AGATTCCAACCTGGTACTGAATAGCTTGCAAATATACGCAGCAAGCTTTC
TAGACCAT
BO18936.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:31:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15443-RB | 1077 | CG15443-PB | 1..1074 | 17..1090 | 5370 | 100 | Plus |
| CG15443-RA | 1077 | CG15443-PA | 1..1074 | 17..1090 | 5370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:31:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15443-RB | 1731 | CG15443-RB | 487..1561 | 16..1090 | 5375 | 100 | Plus |
| CG15443-RA | 1278 | CG15443-RA | 34..1108 | 16..1090 | 5375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:31:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4461827..4462564 | 1090..353 | 3690 | 100 | Minus |
| 2L | 23513712 | 2L | 4462623..4462961 | 354..16 | 1695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:31:49 has no hits.
BO18936.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-18 10:00:35 Download gff for
BO18936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15443-RA | 35..1108 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:33 Download gff for
BO18936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15443-RA | 35..1108 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:50 Download gff for
BO18936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15443-RA | 35..1108 | 17..1092 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:50 Download gff for
BO18936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4461825..4462563 | 354..1092 | 99 | <- | Minus |
| 2L | 4462624..4462960 | 17..353 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:33 Download gff for
BO18936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4461825..4462563 | 354..1092 | 99 | <- | Minus |
| arm_2L | 4462624..4462960 | 17..353 | 100 | | Minus |
BO18936.pep Sequence
Translation from 16 to 1108
> BO18936.pep
MKFKQMDFVTTTGEGSFLRNKIRAYAKDHRVECRIKAKDSLRIGLGQVKQ
EVAALEMGTKDVIGMASRIKRRKHATSEDLCRLSLGFLQSNDNINAFAAI
PGAIQVLVKELTGPHIQRQTDAVECLCNLSLGEAHVSEKIVTLAGSYMVT
YLDGKAERLKRSCLWTLANVLGTCDKAGSVLLQMQIVPKLWRLYIEPNGC
QEDAAICLSLVATRCPQHVSDEDRRYIGQNLPEKLHGQPASEYFMYIVHQ
LEIVTQEHKLDAQQAECLVRFFEATLASPADRLCLIYAVRVMTNLVALGD
TSLIFALADPQNLVQTLNQLFALRDPDLNLDAMRLLKNCLHLKVADSNLV
LNSLQIYAASFLDH
BO18936.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:06:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15443-PB | 358 | CG15443-PB | 1..358 | 1..358 | 1832 | 100 | Plus |
| CG15443-PA | 358 | CG15443-PA | 1..358 | 1..358 | 1832 | 100 | Plus |
