BO18953.complete Sequence
514 bp assembled on 2009-05-13
GenBank Submission: KX796881
> BO18953.complete
GAAGTTATCAGTCGACATGGGCAAAGTGAAAGTAGAGCGCTCCGAGGATG
CCGATGAGTCCGTTGTGGCCAGCGGCGATGTTACCATCAAGGAGGAGGAG
TCCTACGACGACAAGCTGATCTTTGTGAACGCCATCGCGAAACCGATGGC
AGGTAAAAAACTGGCCAAAAAGTGCTACAAACTGGTGAAGAAGGCCATGA
AGCACAAGACTTTCCTGCGAAATGGACTTAAGGATGTACAGACTCGCCTG
CGCAAGGGCGAAACTGGCATTTGCATCTTTGCTGGCGACGTTACACCTGT
GGACATCATGTGCCACTTACCAGCCGTCTGCGAGGAGAAGGGCATCCCCT
ATACCTACACCCCCAGTCGAGCGGATCTTGGAGCTGCCATGGGCGTGAAG
CGCGGTACAGTCGCCCTGCTGGTCCGCCAGAACGAGGAGTACAAGGATCT
GTACGACGAGGTCAAGGAGGAGCTGTCTGCACTAAACATACCCGTCGCAA
GCTTTCTAGACCAT
BO18953.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:28:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NHP2-RB | 483 | CG5258-PB | 1..480 | 17..496 | 2400 | 100 | Plus |
NHP2-RA | 483 | CG5258-PA | 1..480 | 17..496 | 2400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:28:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NHP2-RB | 781 | CG5258-RB | 79..558 | 17..496 | 2400 | 100 | Plus |
NHP2-RA | 667 | CG5258-RA | 79..558 | 17..496 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:28:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14801840..14802090 | 267..17 | 1255 | 100 | Minus |
3L | 28110227 | 3L | 14801551..14801780 | 496..267 | 1150 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:28:22 has no hits.
BO18953.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:36:36 Download gff for
BO18953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NHP2-RA | 100..579 | 17..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:52:52 Download gff for
BO18953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NHP2-RA | 79..558 | 17..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:21:04 Download gff for
BO18953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NHP2-RA | 79..558 | 17..498 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:21:04 Download gff for
BO18953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14801549..14801779 | 268..498 | 99 | <- | Minus |
3L | 14801840..14802090 | 17..267 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:52:52 Download gff for
BO18953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14794649..14794879 | 268..498 | 99 | <- | Minus |
arm_3L | 14794940..14795190 | 17..267 | 100 | | Minus |
BO18953.pep Sequence
Translation from 16 to 514
> BO18953.pep
MGKVKVERSEDADESVVASGDVTIKEEESYDDKLIFVNAIAKPMAGKKLA
KKCYKLVKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCH
LPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALLVRQNEEYKDLYDEVK
EELSALNIPVASFLDH
BO18953.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:52:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NHP2-PB | 160 | CG5258-PB | 1..160 | 1..160 | 818 | 100 | Plus |
NHP2-PA | 160 | CG5258-PA | 1..160 | 1..160 | 818 | 100 | Plus |
hoip-PB | 127 | CG3949-PB | 5..125 | 37..156 | 194 | 35.2 | Plus |
hoip-PA | 127 | CG3949-PA | 5..125 | 37..156 | 194 | 35.2 | Plus |