BO19025.complete Sequence
889 bp assembled on 2009-05-13
GenBank Submission: KX798047
> BO19025.complete
GAAGTTATCAGTCGACATGGACAACAGCATCGTCGAGGAGAACGGCAACT
CGTCGGCGGCATCGGGCTCCAATGACGTGGTCGATGTCGTTGCCCAACAG
GCGGCGGCAGCGGTGGGCGGCGGCGGTGGAGGAGGAGGAGGCGGCGGCGG
TGGTAACCCCCAGCAGCAGCAACAGAACCCACAAAGTACAACGGCCGGCG
GTCCAACGGGTGCGACGAACAACGCCCAGGGAGGCGGAGTGTCCTCCGTG
CTGACCACCACCGCCAACTGCAACATACAATACCCCATCCAGACGCTGGC
GCAGCACGGACTGCAGGTGCAGTCCGTGATACAGGCCAATCCCTCGGGAG
TCATACAGACAGCAGCTGGAACCCAGCAGCAGCAACAGGCGCTGGCCGCC
GCCACAGCGATGCAGAAGGTGGTCTACGTGGCCAAGCCGCCGAACTCGAC
GGTCATCCACACGACGCCTGGCAATGCAGTGCAAGTGCGTAACAAAATCC
CTCCAACCTTTCCGTGTAAGATCAAGCCCGAACCGAACACGCAGCACCCG
GAGGACAGCGACGAGAGTCTGTCGGACGACGATTCCCAGCACCACCGCAG
CGAGCTGACGCGACGGCCGTCGTACAATAAGATCTTCACCGAGATCAGCG
GTCCGGACATGAGCGACAACAGCGGGATAGCGGAGGATCAGACCCGTAAG
CGCGAGATCCGGCTGCAGAAGAACAGGGAGGCGGCGCGTGAGTGCCGGCG
CAAGAAGAAGGAGTACATCAAGTGCCTGGAGAATCGAGTGGCGGTGCTAG
AGAACCAAAACAAAGCGCTCATCGAGGAGCTGAAGTCGCTCAAGGAGCTC
TACTGTCAGACCAAGAACGATGCAAGCTTTCTAGACCAT
BO19025.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:43:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CrebB-RF | 858 | CG6103-PF | 1..855 | 17..871 | 4275 | 100 | Plus |
| CrebB-RP | 846 | CG6103-PP | 1..843 | 17..871 | 4060 | 98.6 | Plus |
| CrebB-RO | 846 | CG6103-PO | 1..843 | 17..871 | 4060 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:43:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CrebB-RF | 2072 | CG6103-RF | 447..1303 | 15..871 | 4285 | 100 | Plus |
| CrebB-RP | 2091 | CG1-RP | 478..1322 | 15..871 | 4070 | 98.6 | Plus |
| CrebB-RO | 2049 | CG6103-RO | 436..1280 | 15..871 | 4070 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:43:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18372131..18372435 | 15..319 | 1525 | 100 | Plus |
| X | 23542271 | X | 18375842..18376048 | 665..871 | 1035 | 100 | Plus |
| X | 23542271 | X | 18373030..18373213 | 313..496 | 920 | 100 | Plus |
| X | 23542271 | X | 18373287..18373455 | 497..665 | 845 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:43:49 has no hits.
BO19025.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:42 Download gff for
BO19025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebB-17A-RH | 16..870 | 17..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:35 Download gff for
BO19025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebB-RF | 307..1161 | 17..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:07:14 Download gff for
BO19025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebB-RF | 449..1303 | 17..873 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:07:14 Download gff for
BO19025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18372133..18372432 | 17..316 | 100 | -> | Plus |
| X | 18373034..18373213 | 317..496 | 100 | -> | Plus |
| X | 18373287..18373455 | 497..665 | 100 | -> | Plus |
| X | 18375843..18376048 | 666..873 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:35 Download gff for
BO19025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18266166..18266465 | 17..316 | 100 | -> | Plus |
| arm_X | 18267067..18267246 | 317..496 | 100 | -> | Plus |
| arm_X | 18267320..18267488 | 497..665 | 100 | -> | Plus |
| arm_X | 18269876..18270081 | 666..873 | 99 | | Plus |
BO19025.pep Sequence
Translation from 16 to 889
> BO19025.pep
MDNSIVEENGNSSAASGSNDVVDVVAQQAAAAVGGGGGGGGGGGGGNPQQ
QQQNPQSTTAGGPTGATNNAQGGGVSSVLTTTANCNIQYPIQTLAQHGLQ
VQSVIQANPSGVIQTAAGTQQQQQALAAATAMQKVVYVAKPPNSTVIHTT
PGNAVQVRNKIPPTFPCKIKPEPNTQHPEDSDESLSDDDSQHHRSELTRR
PSYNKIFTEISGPDMSDNSGIAEDQTRKREIRLQKNREAARECRRKKKEY
IKCLENRVAVLENQNKALIEELKSLKELYCQTKNDASFLDH
BO19025.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:58:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CrebB-PF | 285 | CG6103-PF | 1..285 | 1..285 | 1471 | 100 | Plus |
| CrebB-PP | 281 | CG6103-PP | 1..281 | 1..285 | 1436 | 98.6 | Plus |
| CrebB-PO | 281 | CG6103-PO | 1..281 | 1..285 | 1436 | 98.6 | Plus |
| CrebB-PJ | 281 | CG6103-PJ | 1..281 | 1..285 | 1436 | 98.6 | Plus |
| CrebB-PN | 327 | CG6103-PN | 1..327 | 1..285 | 1374 | 84.6 | Plus |
