BO19601.complete Sequence
865 bp assembled on 2009-05-13
GenBank Submission: KX796883
> BO19601.complete
GAAGTTATCAGTCGACATGTCGAAGTTGAGCGACACTAAGATCCCGATCA
CGGAGTTCCTGGAGGCATACCGTCGCCAGCCGTGCCTCTACAACACACTG
CTGGACTCGTACAAGAATCGTGTGTCCCGGGAGGAGGCCTACGGAGCGAT
CATCCGGTCCCTGAAGATACCCCAACTGACAGTGTCGGACATAAAGCTAA
AGATCAAGAGCGTGCGTACCGTGTACTCTAAGGAGCTGCGCATCTGGATG
CGTGAGAAGGAGCTGGGCAGGACCTACGAACCAAAGTTGTTTTGGTTTAG
GTTGGCCGACTCCTTTCTACGCTCCGTTTCCCTCTCCCACTGCAAAAGGC
AGGGAAAAAATAACAGTTCCAGTGCTCAATTAACGACGATCAAATCGGAT
GAGACGAGCAAGCTTCTTTGCACTGCCGCCGCAGATATCACTATGAGCGA
GGATGCGCTAGAGGAAGAGGATGCAGAGGTAAATGGCGAGCCGGAGGAGT
GTCCTTTGGAGGAAAGCAGGCCAACAGCAAGCATCTGCAAAGATGATTCC
ACGCTCTGCCTGGCGGATCAACCACAGCAGGAGCACTATTCTCAGGGGTG
CAGCAGCTCCCAGCAGCTTCCTCACACGATGGCACAACGAAAATCAAAGT
ACATTACAAGTCTGGACTCGGCCGGAGAGGATGATCTTATTATATTCGGC
CAGAGCATCGCCTCTCAGCTGCGAACCATTCCGGATTCATATTCTCGGTC
CGTGGCTAAGCTGCGTATCCAGCAGGTGCTGTTCGAGGCTGAAACCGGGC
AGTTTCAGAGCACCGAGGTCAATAGCACGCAACTCCAGAATACCTTTGCA
AGCTTTCTAGACCAT
BO19601.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:41:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15601-RA | 834 | CG15601-PA | 1..831 | 17..847 | 4155 | 100 | Plus |
| CG15601-RB | 831 | CG15601-PB | 1..828 | 17..847 | 4075 | 99.6 | Plus |
| CG15601-RC | 696 | CG15601-PC | 189..693 | 343..847 | 2495 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:41:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15601-RA | 1078 | CG15601-RA | 67..898 | 16..847 | 4160 | 100 | Plus |
| CG15601-RB | 1485 | CG15601-RB | 477..1305 | 16..847 | 4080 | 99.6 | Plus |
| CG15601-RC | 940 | CG15601-RC | 256..760 | 343..847 | 2495 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:41:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15711508..15712006 | 349..847 | 2495 | 100 | Plus |
| X | 23542271 | X | 15711123..15711456 | 16..349 | 1670 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 10:41:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 138..196 | 341..404 | 109 | 70.3 | Plus |
BO19601.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:00 Download gff for
BO19601.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15601-RA | 1..831 | 17..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:40:53 Download gff for
BO19601.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15601-RA | 68..898 | 17..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:28:11 Download gff for
BO19601.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15601-RA | 68..898 | 17..849 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:28:11 Download gff for
BO19601.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15711124..15711456 | 17..349 | 100 | -> | Plus |
| X | 15711509..15712006 | 350..849 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:40:53 Download gff for
BO19601.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15605157..15605489 | 17..349 | 100 | -> | Plus |
| arm_X | 15605542..15606039 | 350..849 | 99 | | Plus |
BO19601.pep Sequence
Translation from 16 to 865
> BO19601.pep
MSKLSDTKIPITEFLEAYRRQPCLYNTLLDSYKNRVSREEAYGAIIRSLK
IPQLTVSDIKLKIKSVRTVYSKELRIWMREKELGRTYEPKLFWFRLADSF
LRSVSLSHCKRQGKNNSSSAQLTTIKSDETSKLLCTAAADITMSEDALEE
EDAEVNGEPEECPLEESRPTASICKDDSTLCLADQPQQEHYSQGCSSSQQ
LPHTMAQRKSKYITSLDSAGEDDLIIFGQSIASQLRTIPDSYSRSVAKLR
IQQVLFEAETGQFQSTEVNSTQLQNTFASFLDH
BO19601.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:57:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15601-PA | 277 | CG15601-PA | 1..277 | 1..277 | 1404 | 100 | Plus |
| CG15601-PB | 276 | CG15601-PB | 1..276 | 1..277 | 1387 | 99.6 | Plus |
| CG15601-PC | 231 | CG15601-PC | 1..231 | 1..277 | 1103 | 83.4 | Plus |
| CG15601-PD | 230 | CG15601-PD | 1..230 | 1..277 | 1097 | 83 | Plus |
