BO19605.complete Sequence
979 bp assembled on 2009-05-13
GenBank Submission: KX794778
> BO19605.complete
GAAGTTATCAGTCGACATGTGGTTGCGAGACTTGCGCATTCGTCTAAGTT
TTTTCCACCTGATGGTGTGTCTGCCCAGTATTTACACAAATGTGCCAAGC
TATTCGGATCGGTACAACAGAAGGCCTGTGTCCCAGGATCCAGGAATGGG
AACCTATGGCCGCGGGTACATGGAAAACCGGCAGTTGTCCTATAATCGAC
CTGGACCAGCCAACTTCCAAGATCCCAGAAATGTGGAGTTGCAGCCGAAA
CGACGAGAGTATCTCATTCGATCACATGAAACGCAATCCGATAGGGGGCA
ACACAAATGCCGCATTTGGGTGCCCCCCGATACGGTGGAAAAGTACTCGT
ACCCCAGTGTCATCCAGACGGACCAGGCCAACCGGCTGTCCCTGATCGAG
GTCTGCTGCACCGGATACTCGGCCAGTCGTCTGATGGGCGTAACCGTGTG
CCGGGCGCAATGTGGCTGCCAGAACGGAAGCTGTAAGATTCCTGGTGAGT
GCGAGTGCTATGATGGCTTTGTGCGTAACGACAACGGTGACTGTGTGTTT
GCCTGCCCGCTGGGCTGCCAAAATGGTCAGTGCTATCTGGACGGCAGCTG
TCAGTGTGATCCGGGCTACAAGCTGGACGAGACGCGACGCTTCTGCCGCC
CGATCTGCAGCAGTGGCTGTGGCAGCAGTCCGCGGCACAACTGCACCGAA
CCGGAGATCTGTGGCTGCTCCAAGGGCTATCAGCTGACCGACGACGGATG
CCAGCCCGTCTGCGAACCGGACTGTGGAATCGGCGGACTCTGCAAGGACA
ACAACCAGTGCGACTGCGCTCCTGGTTACAATCTGAGGGATGGTGTCTGC
CAGGCCGATTGCTATCAGAAGTGCAACAATGGCGTGTGTGTCAGCCGAAA
CCGATGTCTATGCGATCCGGGATATACCTACCATGAGCAATCAACCATGT
GCGTTCCAGTAGCAAGCTTTCTAGACCAT
BO19605.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:23:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NimB5-RC | 948 | CG16873-PC | 1..945 | 17..961 | 4725 | 100 | Plus |
NimB5-RB | 948 | CG16873-PB | 1..945 | 17..961 | 4725 | 100 | Plus |
NimB5-RA | 948 | CG16873-PA | 1..945 | 17..961 | 4725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:23:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NimB5-RC | 1395 | CG16873-RC | 112..1056 | 17..961 | 4725 | 100 | Plus |
NimB5-RB | 1335 | CG16873-RB | 52..996 | 17..961 | 4725 | 100 | Plus |
NimB5-RA | 1141 | CG16873-RA | 52..996 | 17..961 | 4725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:23:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13971139..13971682 | 325..868 | 2720 | 100 | Plus |
2L | 23513712 | 2L | 13970559..13970866 | 17..324 | 1540 | 100 | Plus |
2L | 23513712 | 2L | 13971741..13971834 | 868..961 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:23:06 has no hits.
BO19605.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:04 Download gff for
BO19605.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nimB5-RA | 31..975 | 17..963 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:41:34 Download gff for
BO19605.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NimB5-RA | 52..996 | 17..963 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:10:13 Download gff for
BO19605.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NimB5-RA | 52..996 | 17..963 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:10:13 Download gff for
BO19605.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13970559..13970866 | 17..324 | 100 | -> | Plus |
2L | 13971139..13971681 | 325..867 | 100 | -> | Plus |
2L | 13971741..13971834 | 868..963 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:41:34 Download gff for
BO19605.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13970559..13970866 | 17..324 | 100 | -> | Plus |
arm_2L | 13971139..13971681 | 325..867 | 100 | -> | Plus |
arm_2L | 13971741..13971834 | 868..963 | 97 | | Plus |
BO19605.pep Sequence
Translation from 16 to 979
> BO19605.pep
MWLRDLRIRLSFFHLMVCLPSIYTNVPSYSDRYNRRPVSQDPGMGTYGRG
YMENRQLSYNRPGPANFQDPRNVELQPKRREYLIRSHETQSDRGQHKCRI
WVPPDTVEKYSYPSVIQTDQANRLSLIEVCCTGYSASRLMGVTVCRAQCG
CQNGSCKIPGECECYDGFVRNDNGDCVFACPLGCQNGQCYLDGSCQCDPG
YKLDETRRFCRPICSSGCGSSPRHNCTEPEICGCSKGYQLTDDGCQPVCE
PDCGIGGLCKDNNQCDCAPGYNLRDGVCQADCYQKCNNGVCVSRNRCLCD
PGYTYHEQSTMCVPVASFLDH
BO19605.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:05:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NimB5-PC | 315 | CG16873-PC | 1..315 | 1..315 | 1821 | 100 | Plus |
NimB5-PB | 315 | CG16873-PB | 1..315 | 1..315 | 1821 | 100 | Plus |
NimB5-PA | 315 | CG16873-PA | 1..315 | 1..315 | 1821 | 100 | Plus |
NimB1-PA | 402 | CG33119-PA | 53..283 | 92..317 | 518 | 44 | Plus |
NimB1-PB | 403 | CG33119-PB | 53..283 | 92..317 | 518 | 44 | Plus |
NimB1-PA | 402 | CG33119-PA | 198..360 | 130..305 | 284 | 34.3 | Plus |