BO19606.complete Sequence
646 bp assembled on 2009-05-13
GenBank Submission: KX794372
> BO19606.complete
GAAGTTATCAGTCGACATGACTTCTCCGAGATTGTTTGTTCTCGAAGATC
TGTTCAAGTTTAACAATATTGTGATGGATCCCTTGGCGGAAGTGTACTCC
TTGCCATTCTTGCTTCCCAAGATTCTGGAGCATCCCGAACTGGTTCTTGC
CGCCGATGCTCCTGACAATAGTCTCATGGGCTTCATTCTGGGGACACGCG
TCGAGGATGCGACTGAATCTTTTGGAGATGCAAAGACTATGACCTGGAAT
CATGGACACATCTCTGCTCTGGCCGTAGCTCAGGATTATCGTAAACTGGG
CTTGGGCACTCGGCTCTTAACAACCGTTAGGGATATGATGGATCGTCAGA
AAGACTTTTATATAGATCTATTTGTGCGAGAGAAGAATACAATTGCCATT
GGGCTTTACGAGTCCTTGGGATATGTGAAATATCGCTGGATACCTAAGTT
TTATGCCGACGACCATGGATACGAAATGAGACTACCTTTGTCCAGCGATG
TGGATAGGAAATCCTTAGAGGGAATAATAATCAAGAAAATCTACAGCTTT
GGCAATAAGTTGTACTATCTGCTGATGTTTTACATATTCGGAATTATAGC
TATAGTTATTGGTGGAATATTGGTTGAAGCAAGCTTTCTAGACCAT
BO19606.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:37:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31851-RB | 615 | CG31851-PB | 1..612 | 17..628 | 3060 | 100 | Plus |
| CG31851-RA | 615 | CG31851-PA | 1..612 | 17..628 | 3060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:37:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31851-RB | 1168 | CG31851-RB | 203..815 | 16..628 | 3065 | 100 | Plus |
| CG31851-RA | 860 | CG31851-RA | 203..815 | 16..628 | 3065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:37:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13257679..13258291 | 16..628 | 3065 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:37:32 has no hits.
BO19606.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:03 Download gff for
BO19606.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31851-RA | 204..815 | 17..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:35 Download gff for
BO19606.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31851-RA | 204..815 | 17..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:12:22 Download gff for
BO19606.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31851-RA | 204..815 | 17..630 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:12:22 Download gff for
BO19606.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13257680..13258291 | 17..630 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:35 Download gff for
BO19606.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13257680..13258291 | 17..630 | 99 | | Plus |
BO19606.pep Sequence
Translation from 16 to 646
> BO19606.pep
MTSPRLFVLEDLFKFNNIVMDPLAEVYSLPFLLPKILEHPELVLAADAPD
NSLMGFILGTRVEDATESFGDAKTMTWNHGHISALAVAQDYRKLGLGTRL
LTTVRDMMDRQKDFYIDLFVREKNTIAIGLYESLGYVKYRWIPKFYADDH
GYEMRLPLSSDVDRKSLEGIIIKKIYSFGNKLYYLLMFYIFGIIAIVIGG
ILVEASFLDH
BO19606.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:04:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31851-PB | 204 | CG31851-PB | 1..204 | 1..204 | 1052 | 100 | Plus |
| CG31851-PA | 204 | CG31851-PA | 1..204 | 1..204 | 1052 | 100 | Plus |
| NAA20-PD | 175 | CG14222-PD | 1..160 | 1..167 | 343 | 40 | Plus |
| NAA20-PC | 175 | CG14222-PC | 1..160 | 1..167 | 343 | 40 | Plus |
| NAA20-PA | 175 | CG14222-PA | 1..160 | 1..167 | 343 | 40 | Plus |
