BO19607.complete Sequence
874 bp assembled on 2009-05-13
GenBank Submission: KX797739
> BO19607.complete
GAAGTTATCAGTCGACATGAAATACACCGCCCTTTGGCGCTCGGTGGGCG
CCATGAGCTGCGGATCCCTGGTCACCTACTTTGCCATCCGGCTGTTCGAT
GGCCTGGAACCCTCCATGTTATCAGGTGGAGCACAAGGGGGTAAGGGGCG
GGCGATTGAACCTTTGGCCAGTGGCGCCTGGCGGCACCATTGGGACTTGG
ACAAGCCGCAGCTGCAAAAGGTGGCAAATGGCGAGGAGTCCTCCGCCCTG
CGACACATTATCCTGGTGAGACATGGCGAGTACACGAGGACCCCGAATGG
AAGCCACCTCACGGAACTGGGCCGTCGGCAGGCGGAACGGACGGGGCAAA
GGTTGCGGGAAATGGGCTTGTCCTGGGACCACGTGGTGGCCTCTACAATG
CCGCGTGCCGAGGAGACGGCCATGATCATCCTGAAGCAGCTGAACCTCGA
TCCCCTGAAGATGAAGCGCTGCACTTTGCTGCCGGAGGGCACTCCGTACC
CAGGAGATCCCCCCTCCAAGAGGAGTGCCCGCAGCCTGGACCTGGCCTAT
CAGAGGGATGGTCCGCGGATCGAGGCCGCCTTTAGGCGCTACTTCTTCAG
GGCCAGTCCGGAGCAGGAGCACGACTCGTACCTGCTCATCGTGGGCCACT
CGAATGTGATCCGTTACCTGATTCTGCGGGCCCTGCAGCTTCCTCCGGCC
GCCTGGACGCGCCTCAACCTGAACCACGGCTCCATCACCTGGCTGACTGT
GTGGCCGTCTGGCTACGTTACCTTGCGCTGCTTGGGGGACTCCGGCTTCA
TGCCGGTGACCGAGATCACCCATCGAAGGCCGTCACCGGCGAAATCCGGC
AGTAACGCAAGCTTTCTAGACCAT
BO19607.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:21:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pgam5-2-RA | 843 | CG15874-PA | 1..840 | 17..856 | 4200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:21:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pgam5-2-RA | 1390 | CG15874-RA | 37..877 | 16..856 | 4205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:21:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24431857..24432697 | 856..16 | 4205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:21:18 has no hits.
BO19607.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:02 Download gff for
BO19607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15874-RA | 1..840 | 17..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:52:41 Download gff for
BO19607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pgam5-2-RA | 38..877 | 17..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:16:39 Download gff for
BO19607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pgam5-2-RA | 38..877 | 17..858 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:16:39 Download gff for
BO19607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24431853..24432696 | 17..858 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:52:41 Download gff for
BO19607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20319376..20320219 | 17..858 | 99 | | Minus |
BO19607.pep Sequence
Translation from 16 to 874
> BO19607.pep
MKYTALWRSVGAMSCGSLVTYFAIRLFDGLEPSMLSGGAQGGKGRAIEPL
ASGAWRHHWDLDKPQLQKVANGEESSALRHIILVRHGEYTRTPNGSHLTE
LGRRQAERTGQRLREMGLSWDHVVASTMPRAEETAMIILKQLNLDPLKMK
RCTLLPEGTPYPGDPPSKRSARSLDLAYQRDGPRIEAAFRRYFFRASPEQ
EHDSYLLIVGHSNVIRYLILRALQLPPAAWTRLNLNHGSITWLTVWPSGY
VTLRCLGDSGFMPVTEITHRRPSPAKSGSNASFLDH
BO19607.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:04:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pgam5-2-PA | 280 | CG15874-PA | 1..280 | 1..280 | 1486 | 100 | Plus |
Pgam5-PB | 288 | CG14816-PB | 2..286 | 8..277 | 576 | 44.2 | Plus |
Pgam5-PA | 289 | CG14816-PA | 2..287 | 8..277 | 573 | 44.2 | Plus |