Clone BO19610 Report

Search the DGRC for BO19610

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:196
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG32987-RA
Protein status:BO19610.pep: Imported from assembly
Sequenced Size:805

Clone Sequence Records

BO19610.complete Sequence

805 bp assembled on 2009-05-13

GenBank Submission: KX797141

> BO19610.complete
GAAGTTATCAGTCGACATGGACAACATTTACCACCAGGACAACATCCGGC
CGACGATCGAGCAGCTGGACCCAATGACCCAGTTCATCCGCAGCATCTAT
AACATTGGCCTGATCCTTATCGGAATTACGGTGGGCGCATGGATTCTGCT
CATGCTGACCCATATTCACCTGCAGAGGTACCTTCCGTTTCCCTGCTACG
TCCTGGCTCTAATAATTTTTCTGGTGATGATATGCATGCATTGTATCCCG
AGAATATCCTACTACTCTCCCTGTAAGTGGTTCATGACAGGTCTGGTGGT
TGTGTGTACCACCTTGTTTGGCTGCCATTTCATCCACGACTTGAGCCCGC
TCATTATCAGTTTCGTGATGATCGGCGTGGCCCTGATCATTATGTTACTC
AACTTCTCTGGGGCCATGTGCCCGCAGGAGTTCCTGCCCGGCGGTGTTTG
CTCCACGCTGCTGATGATGGCACTGCTGTTGGTCTTGACCATTGTGGGAA
TCGTCCAGCTCTGCACCGGGAGTGTTGAGCTGCTCGACACCTTCGTCAGC
ATTCTGTTCCTGATGCTGATCATAGCGATCCCCATTCAGGCGCAGTTCAA
CCATGGCCGTCTGAACGTCGTGGAAGTGGTTCCCGAAGAGCACCTCATGG
TCTGCACCCTGACTTTATACTTGCATTCAATGATGTTCTTCTTCTGCGTG
TGCTACTTCATCCTGGTCGACGAGAGAAAGGAGGCCATCAGACAAACATC
TGAAGCTCCGAAAATTTCACTCGAAAATGATTTTGATGCAAGCTTTCTAG
ACCAT

BO19610.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:01:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG32987-RA 774 CG32987-PA 1..771 17..787 3855 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG32987-RA 1037 CG32987-RA 45..815 17..787 3855 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:01:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8863855..8864625 17..787 3855 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:01:41 has no hits.

BO19610.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:21 Download gff for BO19610.complete
Subject Subject Range Query Range Percent Splice Strand
CG32987-RA 14..784 17..789 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:05:50 Download gff for BO19610.complete
Subject Subject Range Query Range Percent Splice Strand
CG32987-RA 45..815 17..789 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:13:05 Download gff for BO19610.complete
Subject Subject Range Query Range Percent Splice Strand
CG32987-RA 45..815 17..789 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:13:05 Download gff for BO19610.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8863855..8864625 17..789 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:05:50 Download gff for BO19610.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8863855..8864625 17..789 99   Plus

BO19610.pep Sequence

Translation from 16 to 805

> BO19610.pep
MDNIYHQDNIRPTIEQLDPMTQFIRSIYNIGLILIGITVGAWILLMLTHI
HLQRYLPFPCYVLALIIFLVMICMHCIPRISYYSPCKWFMTGLVVVCTTL
FGCHFIHDLSPLIISFVMIGVALIIMLLNFSGAMCPQEFLPGGVCSTLLM
MALLLVLTIVGIVQLCTGSVELLDTFVSILFLMLIIAIPIQAQFNHGRLN
VVEVVPEEHLMVCTLTLYLHSMMFFFCVCYFILVDERKEAIRQTSEAPKI
SLENDFDASFLDH

BO19610.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:18:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG32987-PA 257 CG32987-PA 1..257 1..257 1344 100 Plus
CG32983-PA 250 CG32983-PA 22..226 23..231 257 28.9 Plus
CG32988-PA 255 CG32988-PA 41..248 23..233 204 22.3 Plus