BO19613.complete Sequence
874 bp assembled on 2009-05-13
GenBank Submission: KX799481
> BO19613.complete
GAAGTTATCAGTCGACATGCTGAAGCGCAAACTGAACCAGCAAAAATGCA
ATCTGGAGATTGGGGAGCCCACTAAGACATCCGCAAGGCAGGGCAGTACA
TCGGAATTCTTTGATAAGCCGCTGTGGCTTAAATTCTACGAAACCGAAGT
CAAGTTAAATGAGGCGCTGGAAAAACTGAATCCTCCTGAGAGCACACCGT
TCATCTACAACCCGATAGTATATGCATCCCAGCTGCACTGCGACTATTTA
CGTCGCTATATGGACGGTCCCAAGAAGCTGGTATTTGTTGGCATGAATCC
AGGGCCCAATGGAATGGCCCAAACCGGAATTCCCTTTGGCAATGTGCGCA
CAGTAAAGTTGTTAATGCAGCTGGCTGGTTCGGTGGACCAACCTCCAGTC
GTGCATCCCAAACGTCCAGTCGCTGGCTTGGATTGTCGGATTGAGGAGCC
CAGTGGTGTGCGTTTGTGGGAGCTGTTCCTCCGACTGGCTGGCAGCATGC
AGACCTTCTCCCAGCAGTGTTTCGTCCACAATTTCTGTCCGCTAGCTTTC
TTTGGCGCAGATGGCAGGAACATAACGCCCAGTGAAATCAGAGGAGCTTA
CAAAAATCAGCTAGGAGACCTGTGCCTGCACACCCTGGAGGAACAACTGA
AGCTCCTCCAACCCGACGTGATTGTGGCCGTTGGGGAGTATGTTCACAGC
GCACTGAAGCGTTCAGGATATGCCAAATCCAATTGCGTTTCGGTGCTCCG
ACTGCCGCATCCTAGTCCGCGTTCTACTAATAATACCAATTGGCCCGAGA
AGGCTCAAGCATTTTTGGAGGAGCACAACCTAATCCGATTCATGCGGAAT
GAGGCTGCAAGCTTTCTAGACCAT
BO19613.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:52:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5285-RA | 843 | CG5285-PA | 1..840 | 17..856 | 4200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:52:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5285-RA | 983 | CG5285-RA | 70..909 | 17..856 | 4200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:52:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17151029..17151556 | 329..856 | 2640 | 100 | Plus |
3R | 32079331 | 3R | 17150656..17150967 | 17..328 | 1560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:52:36 has no hits.
BO19613.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:58 Download gff for
BO19613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5285-RA | 1..840 | 17..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:42:33 Download gff for
BO19613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5285-RA | 70..909 | 17..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:33:04 Download gff for
BO19613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5285-RA | 70..909 | 17..858 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:33:04 Download gff for
BO19613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17150656..17150967 | 17..328 | 100 | -> | Plus |
3R | 17151029..17151556 | 329..858 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:42:33 Download gff for
BO19613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12976378..12976689 | 17..328 | 100 | -> | Plus |
arm_3R | 12976751..12977278 | 329..858 | 99 | | Plus |
BO19613.pep Sequence
Translation from 16 to 874
> BO19613.pep
MLKRKLNQQKCNLEIGEPTKTSARQGSTSEFFDKPLWLKFYETEVKLNEA
LEKLNPPESTPFIYNPIVYASQLHCDYLRRYMDGPKKLVFVGMNPGPNGM
AQTGIPFGNVRTVKLLMQLAGSVDQPPVVHPKRPVAGLDCRIEEPSGVRL
WELFLRLAGSMQTFSQQCFVHNFCPLAFFGADGRNITPSEIRGAYKNQLG
DLCLHTLEEQLKLLQPDVIVAVGEYVHSALKRSGYAKSNCVSVLRLPHPS
PRSTNNTNWPEKAQAFLEEHNLIRFMRNEAASFLDH
BO19613.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:04:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5285-PA | 280 | CG5285-PA | 1..280 | 1..280 | 1493 | 100 | Plus |