Clone BO19616 Report

Search the DGRC for BO19616

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:196
Well:16
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO19616.pep: Imported from assembly
Sequenced Size:1270

Clone Sequence Records

BO19616.complete Sequence

1270 bp assembled on 2009-05-13

> BO19616.complete
GAAGTTATCAGTCGACATGGGCACCAAGGCGTCGGGGGCCAAATTCAATT
TTCGTCCCCAGGTGCGCACCTTCGCCAATCCCAGCTCGGTGACCACCTCC
ACGGTCCCGGTGGCAGCAGAAACCAAGCTGTCGGACCAGGAGGCGCTGGA
GGAGATCCGCCAGCTGAGCATGCAGCTGCAGCGCATCCAGGAGATGGCTC
CGCCCAAGGGCGTGGCGGTTATGACGATCTCCAGCCTGCTGGACGGCCTA
AAGACACCCGGTGGCCTAATGGTTGTGGCGGCGGCGGCGGGCGCCACTGC
CCAAGGCCACTCGGCCGCCAATCGCCAGAGCGCACTGCCCCTGCTCGCCC
TGAACGTGGAGATGCAGAAGTACAGCCAGCAGAACAACAACTCCAACGGG
GGTCGGGGGAGTGGCCGAACCAGTATTCCCACCATGGTGCTGGAAACGCC
GCCCAGCTCGACGCCCCCGTCGGCGGCTTACGAGGAGCGGGCCGTGAACA
CGGAGCTCAGTGGCGACGACTTCCGGGAGCAGCTGCTGCGGCGAACGGCC
GATGGCCACATCATCTGCAGTCGCTGCCTGGACGCGTCCAAGGAGCACTA
CTACTGCTGTCCGCCGCGCAGCGCCTGCGACCATCTCGGCTCGCCGAAGG
AGGAGGGCAGCCTGAGCTTCGCCAACATCAAGCTGGAGTGTATGTGCTCC
CAGTCGGAGGACCTTGACCAGGACGTGGGCCAGCGCCAGCGGAGGCCCAC
GGTGCGAACGGCGGCCACCAATACGCCGCCGACCAGCTGCAAACGGGCTC
CACGCAACCTGCTGGAGGCCGAGCTCAGCATTTCGTATCAAATTTGTGAT
AACTGTAGAAGTAAGTACAAGCTAACTGGCCGCCGACGCAGCGGCAGCTA
CTCCCAGGCTCAGGAGAATCCCCAGCTGGGCCAGCAGCCGGCTGGACAGT
TGCCCATCCAATCCCGCAGCACCGAGCTTCTGGACCGCACCACCGCCGCT
GAGGTCGAGACCGAGGTCGAGGCGAGGACCAAGGCGGCCCACTCCACGGA
CGACATAGTCCTGTACTCCAGTGCACCCGAGGAGCTGGCCGCTCAGCTGG
CCGAGCCCGTGGCGGCACCCTCCCTGGGCAATGTGTCCAGCAACTCGAAC
AACTCCACCAGCGGCAGTGGAGGCACCACTCGACCCAAGCGGCCAGACAA
GTTGGTCTTGGACCTCAACGATCGGTCCAAGTATACCAAAGAGGTGTCCG
TGGCAAGCTTTCTAGACCAT

BO19616.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:22:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG43795-RA 4263 CG43795-PA 3020..4260 12..1252 6175 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:22:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG43795-RA 5891 CG43795-RA 3574..4814 12..1252 6175 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:22:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23489785..23490920 117..1252 5665 99.9 Plus
2R 25286936 2R 23487140..23487247 12..119 525 99.1 Plus
Blast to na_te.dros performed on 2014-11-28 01:22:18 has no hits.

BO19616.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:57 Download gff for BO19616.complete
Subject Subject Range Query Range Percent Splice Strand
CG34372-RC 1795..3030 17..1254 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:47:49 Download gff for BO19616.complete
Subject Subject Range Query Range Percent Splice Strand
CG43795-RA 3579..4814 17..1254 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:52:16 Download gff for BO19616.complete
Subject Subject Range Query Range Percent Splice Strand
CG43795-RA 3579..4814 17..1254 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:52:16 Download gff for BO19616.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23487145..23487247 17..119 100 -> Plus
2R 23489788..23490920 120..1254 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:47:49 Download gff for BO19616.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19374668..19374770 17..119 100 -> Plus
arm_2R 19377311..19378443 120..1254 99   Plus

BO19616.pep Sequence

Translation from 16 to 1270

> BO19616.pep
MGTKASGAKFNFRPQVRTFANPSSVTTSTVPVAAETKLSDQEALEEIRQL
SMQLQRIQEMAPPKGVAVMTISSLLDGLKTPGGLMVVAAAAGATAQGHSA
ANRQSALPLLALNVEMQKYSQQNNNSNGGRGSGRTSIPTMVLETPPSSTP
PSAAYEERAVNTELSGDDFREQLLRRTADGHIICSRCLDASKEHYYCCPP
RSACDHLGSPKEEGSLSFANIKLECMCSQSEDLDQDVGQRQRRPTVRTAA
TNTPPTSCKRAPRNLLEAELSISYQICDNCRSKYKLTGRRRSGSYSQAQE
NPQLGQQPAGQLPIQSRSTELLDRTTAAEVETEVEARTKAAHSTDDIVLY
SSAPEELAAQLAEPVAAPSLGNVSSNSNNSTSGSGGTTRPKRPDKLVLDL
NDRSKYTKEVSVASFLDH

BO19616.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:04:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG43795-PA 1420 CG43795-PA 1009..1420 1..412 2096 100 Plus