BO19616.complete Sequence
1270 bp assembled on 2009-05-13
> BO19616.complete
GAAGTTATCAGTCGACATGGGCACCAAGGCGTCGGGGGCCAAATTCAATT
TTCGTCCCCAGGTGCGCACCTTCGCCAATCCCAGCTCGGTGACCACCTCC
ACGGTCCCGGTGGCAGCAGAAACCAAGCTGTCGGACCAGGAGGCGCTGGA
GGAGATCCGCCAGCTGAGCATGCAGCTGCAGCGCATCCAGGAGATGGCTC
CGCCCAAGGGCGTGGCGGTTATGACGATCTCCAGCCTGCTGGACGGCCTA
AAGACACCCGGTGGCCTAATGGTTGTGGCGGCGGCGGCGGGCGCCACTGC
CCAAGGCCACTCGGCCGCCAATCGCCAGAGCGCACTGCCCCTGCTCGCCC
TGAACGTGGAGATGCAGAAGTACAGCCAGCAGAACAACAACTCCAACGGG
GGTCGGGGGAGTGGCCGAACCAGTATTCCCACCATGGTGCTGGAAACGCC
GCCCAGCTCGACGCCCCCGTCGGCGGCTTACGAGGAGCGGGCCGTGAACA
CGGAGCTCAGTGGCGACGACTTCCGGGAGCAGCTGCTGCGGCGAACGGCC
GATGGCCACATCATCTGCAGTCGCTGCCTGGACGCGTCCAAGGAGCACTA
CTACTGCTGTCCGCCGCGCAGCGCCTGCGACCATCTCGGCTCGCCGAAGG
AGGAGGGCAGCCTGAGCTTCGCCAACATCAAGCTGGAGTGTATGTGCTCC
CAGTCGGAGGACCTTGACCAGGACGTGGGCCAGCGCCAGCGGAGGCCCAC
GGTGCGAACGGCGGCCACCAATACGCCGCCGACCAGCTGCAAACGGGCTC
CACGCAACCTGCTGGAGGCCGAGCTCAGCATTTCGTATCAAATTTGTGAT
AACTGTAGAAGTAAGTACAAGCTAACTGGCCGCCGACGCAGCGGCAGCTA
CTCCCAGGCTCAGGAGAATCCCCAGCTGGGCCAGCAGCCGGCTGGACAGT
TGCCCATCCAATCCCGCAGCACCGAGCTTCTGGACCGCACCACCGCCGCT
GAGGTCGAGACCGAGGTCGAGGCGAGGACCAAGGCGGCCCACTCCACGGA
CGACATAGTCCTGTACTCCAGTGCACCCGAGGAGCTGGCCGCTCAGCTGG
CCGAGCCCGTGGCGGCACCCTCCCTGGGCAATGTGTCCAGCAACTCGAAC
AACTCCACCAGCGGCAGTGGAGGCACCACTCGACCCAAGCGGCCAGACAA
GTTGGTCTTGGACCTCAACGATCGGTCCAAGTATACCAAAGAGGTGTCCG
TGGCAAGCTTTCTAGACCAT
BO19616.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:22:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43795-RA | 4263 | CG43795-PA | 3020..4260 | 12..1252 | 6175 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:22:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43795-RA | 5891 | CG43795-RA | 3574..4814 | 12..1252 | 6175 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:22:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23489785..23490920 | 117..1252 | 5665 | 99.9 | Plus |
2R | 25286936 | 2R | 23487140..23487247 | 12..119 | 525 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:22:18 has no hits.
BO19616.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:57 Download gff for
BO19616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34372-RC | 1795..3030 | 17..1254 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:47:49 Download gff for
BO19616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43795-RA | 3579..4814 | 17..1254 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:52:16 Download gff for
BO19616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43795-RA | 3579..4814 | 17..1254 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:52:16 Download gff for
BO19616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23487145..23487247 | 17..119 | 100 | -> | Plus |
2R | 23489788..23490920 | 120..1254 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:47:49 Download gff for
BO19616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19374668..19374770 | 17..119 | 100 | -> | Plus |
arm_2R | 19377311..19378443 | 120..1254 | 99 | | Plus |
BO19616.pep Sequence
Translation from 16 to 1270
> BO19616.pep
MGTKASGAKFNFRPQVRTFANPSSVTTSTVPVAAETKLSDQEALEEIRQL
SMQLQRIQEMAPPKGVAVMTISSLLDGLKTPGGLMVVAAAAGATAQGHSA
ANRQSALPLLALNVEMQKYSQQNNNSNGGRGSGRTSIPTMVLETPPSSTP
PSAAYEERAVNTELSGDDFREQLLRRTADGHIICSRCLDASKEHYYCCPP
RSACDHLGSPKEEGSLSFANIKLECMCSQSEDLDQDVGQRQRRPTVRTAA
TNTPPTSCKRAPRNLLEAELSISYQICDNCRSKYKLTGRRRSGSYSQAQE
NPQLGQQPAGQLPIQSRSTELLDRTTAAEVETEVEARTKAAHSTDDIVLY
SSAPEELAAQLAEPVAAPSLGNVSSNSNNSTSGSGGTTRPKRPDKLVLDL
NDRSKYTKEVSVASFLDH
BO19616.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:04:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43795-PA | 1420 | CG43795-PA | 1009..1420 | 1..412 | 2096 | 100 | Plus |