BO19618.complete Sequence
1042 bp assembled on 2009-05-13
GenBank Submission: KX794945
> BO19618.complete
GAAGTTATCAGTCGACATGCGCGAGATCGAAGGTGCAAATGCCAGTGTCA
GCACCTCGAAACAAAGCGAACGCAAAGTGAATCCTCTGGGCAAACTAAAC
AAACGCTTCTTAGGCCGCACCATAAACACCGCGATTCGGCATAATGATAG
AGAAAAGGAGCGCACACAGGCAAATTGCCGACAGAAGCTGCAGGATCTGG
ATGATGTGCACGAAAGGAGGAAGTCCAACTACTTTTACAGCCGCGATGCA
CCCAGAACTCAAAGTGTTGATAGAAGCAGAAGTTCCAGCAGAAGGCGCAG
CAGGAGCCGCCACAAAAAGGCCAAGAAGCATCGCAGCCGAAGAAGAACTA
GGAGCAGCAGAAGTTCAAGCCGCAGTCGAAGTCGCAGCAGTTCACATCGG
CGAAAAAAGCGCAAAAAGAAGGTTAAAAAACACAAAAAATCACACAGAAG
ACGAAGAAGCAGCCAGAGCAGCAGCGGTTGCGATTGGGAATCCGCACCCA
GCGAGTCGTTACGTATACCCCCGCCTTCAGATGTGTTCCTAAACCACTCC
AAGCAAATGGCTCTTGCAGTGGCCATGGCCTATGGTCAATTACTAAACCC
GAGCAGCCAAAAGAAAGCCAGCGAGTCTAAGGAACACTCCTCCTCTCCTA
TAAGCGATATATTCCGGGAACTTATGTCCGACGAAGAGGTGGACAAATCC
GAGAAGCCCGAGGCCCTGTCCATTTCATCCAGCGACGAAGAGCCAAATGT
TCTCACCATTAAAGTAAGCTCGAGCTCCGAGTCCAGCGGCAATAAATCAA
GCTCGGACTCAGATTCAGAAGCAAAGAACAGCGTACGCAGCTGTATAACC
CTAGAATCTGGTGATAATAGTGATATTGAGATAATTGAGTACCATGAAGA
GCCCAAAAAAAAGGCATGTGAAACTGAACCTGCGTCTGAACCTGAATATC
CGTCTCAATCGGATAGCACAAATCAACAAGTGGACGATAGCACAGCTGTC
ACTACAGTGGACCTGACCGAGGATGCAAGCTTTCTAGACCAT
BO19618.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:44:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14074-RB | 1011 | CG14074-PB | 1..1008 | 17..1024 | 5040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:44:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14074-RB | 1149 | CG14074-RB | 57..1064 | 17..1024 | 5040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:43:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18866339..18867346 | 17..1024 | 5040 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 00:43:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1063..1155 | 333..422 | 132 | 66 | Plus |
BO19618.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:55 Download gff for
BO19618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14074-RA | 115..1122 | 17..1026 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:30:29 Download gff for
BO19618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14074-RB | 57..1064 | 17..1026 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:37:00 Download gff for
BO19618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14074-RB | 57..1064 | 17..1026 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:37:00 Download gff for
BO19618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18866339..18867346 | 17..1026 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:30:29 Download gff for
BO19618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18859439..18860446 | 17..1026 | 99 | | Plus |
BO19618.pep Sequence
Translation from 16 to 1042
> BO19618.pep
MREIEGANASVSTSKQSERKVNPLGKLNKRFLGRTINTAIRHNDREKERT
QANCRQKLQDLDDVHERRKSNYFYSRDAPRTQSVDRSRSSSRRRSRSRHK
KAKKHRSRRRTRSSRSSSRSRSRSSSHRRKKRKKKVKKHKKSHRRRRSSQ
SSSGCDWESAPSESLRIPPPSDVFLNHSKQMALAVAMAYGQLLNPSSQKK
ASESKEHSSSPISDIFRELMSDEEVDKSEKPEALSISSSDEEPNVLTIKV
SSSSESSGNKSSSDSDSEAKNSVRSCITLESGDNSDIEIIEYHEEPKKKA
CETEPASEPEYPSQSDSTNQQVDDSTAVTTVDLTEDASFLDH
BO19618.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:04:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14074-PB | 336 | CG14074-PB | 1..336 | 1..336 | 1689 | 100 | Plus |
| Srp54-PA | 513 | CG4602-PA | 284..509 | 45..287 | 175 | 29 | Plus |
| CG6695-PA | 961 | CG6695-PA | 403..709 | 57..330 | 174 | 27.2 | Plus |
| CG5514-PC | 1109 | CG5514-PC | 592..925 | 41..336 | 166 | 24 | Plus |
| CG5514-PA | 1109 | CG5514-PA | 592..925 | 41..336 | 166 | 24 | Plus |
