BO19621.complete Sequence
997 bp assembled on 2009-05-13
GenBank Submission: KX797254
> BO19621.complete
GAAGTTATCAGTCGACATGTCAGAAGTAGTACGAAACACTCTGGTAAAAC
TGCAGGCCATAATCGCACTGATCGGTTTGGCGGCCATAACGCCACTACTC
ATTTTGGTAGCACTACTCGGCCGACTGATCGCCAAACTCTGCTGGTGCTC
GGCGCCGAAAAGTATCGCGGGAGAAGTGGCCGTGGTCACTGGAGCTGGTC
ATGGACTAGGTCGTGCCATATCCTTGGAACTGGCTAAAAAAGGCTGTCAC
ATCGCCGTGGTGGATATCAATGTTTCCGGAGCGGAAGACACCGTCAAGCA
AATCCAAGATATCTATAAGGTTCGCGCAAAGGCATACAAGGCCAATGTAA
CCAATTACGACGATCTAGTTGAGCTGAACTCCAAAGTGGTCGAGGAAATG
GGTCCAGTTACCGTCCTGGTTAATAATGCTGGTGTCATGATGCATCGCAA
TATGTTTAATCCGGACCCGGCCGATGTGCAGCTAATGATCAATGTTAACC
TTACGTCGCATTTCTGGACCAAGCTGGTTTTCCTACCCAAAATGAAGGAA
TTGCGCAAAGGTTTCATTGTTACAATCAGTTCATTGGCAGGTGTTTTCCC
ATTGCCCTACAGTGCGACTTACACCACCACCAAATCTGGCGCCTTGGCGC
ACATGAGGACCCTGCGCATGGAGTTGGATCTGGAGAACCAGAAGGACATC
CATGTGACCACCGTGCTGCCCAGTTTTCTGCGCACGAACAGTGATGTTAC
GCAGCTGACGCATACCATAGGATTTGGCGACGTATATCCACTGTTCACCG
GAGAGGAGGTCGCCCAGCGTATAGTGGCCGGAATGGTGAGGGGTGAGGCC
GAGATCACCGTGCCGGGAATGGCATGCCTACTCTACCGAGTGATTCTCAT
ACTTCCGGCTGACTGGCAAGATCGAATTATCCTATTGTTCAGCAGGAATA
AATTTAAGAAGCTCCGAGATGAGCATTCCGCAAGCTTTCTAGACCAT
BO19621.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:00:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13833-RA | 966 | CG13833-PA | 1..963 | 17..979 | 4815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:00:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13833-RA | 1076 | CG13833-RA | 57..1019 | 17..979 | 4815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:00:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23033341..23033732 | 979..588 | 1960 | 100 | Minus |
| 3R | 32079331 | 3R | 23033935..23034113 | 517..339 | 895 | 100 | Minus |
| 3R | 32079331 | 3R | 23035338..23035507 | 186..17 | 850 | 100 | Minus |
| 3R | 32079331 | 3R | 23034227..23034384 | 341..184 | 790 | 100 | Minus |
| 3R | 32079331 | 3R | 23033794..23033870 | 593..517 | 385 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:00:44 has no hits.
BO19621.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:54 Download gff for
BO19621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13833-RA | 1..963 | 17..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:07:11 Download gff for
BO19621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13833-RA | 57..1019 | 17..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:09:15 Download gff for
BO19621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13833-RA | 57..1019 | 17..981 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:09:15 Download gff for
BO19621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23035340..23035507 | 17..184 | 100 | | Minus |
| 3R | 23033338..23033729 | 591..981 | 99 | <- | Minus |
| 3R | 23033797..23033869 | 518..590 | 100 | <- | Minus |
| 3R | 23033935..23034111 | 341..517 | 100 | <- | Minus |
| 3R | 23034228..23034383 | 185..340 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:07:11 Download gff for
BO19621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18859060..18859451 | 591..981 | 99 | <- | Minus |
| arm_3R | 18859519..18859591 | 518..590 | 100 | <- | Minus |
| arm_3R | 18859657..18859833 | 341..517 | 100 | <- | Minus |
| arm_3R | 18859950..18860105 | 185..340 | 100 | <- | Minus |
| arm_3R | 18861062..18861229 | 17..184 | 100 | | Minus |
BO19621.pep Sequence
Translation from 16 to 997
> BO19621.pep
MSEVVRNTLVKLQAIIALIGLAAITPLLILVALLGRLIAKLCWCSAPKSI
AGEVAVVTGAGHGLGRAISLELAKKGCHIAVVDINVSGAEDTVKQIQDIY
KVRAKAYKANVTNYDDLVELNSKVVEEMGPVTVLVNNAGVMMHRNMFNPD
PADVQLMINVNLTSHFWTKLVFLPKMKELRKGFIVTISSLAGVFPLPYSA
TYTTTKSGALAHMRTLRMELDLENQKDIHVTTVLPSFLRTNSDVTQLTHT
IGFGDVYPLFTGEEVAQRIVAGMVRGEAEITVPGMACLLYRVILILPADW
QDRIILLFSRNKFKKLRDEHSASFLDH
BO19621.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:03:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13833-PA | 321 | CG13833-PA | 1..321 | 1..321 | 1620 | 100 | Plus |
| CG17121-PA | 361 | CG17121-PA | 52..347 | 9..308 | 455 | 35.9 | Plus |
| CG9265-PD | 399 | CG9265-PD | 82..317 | 48..289 | 320 | 30.1 | Plus |
| CG9265-PC | 399 | CG9265-PC | 82..317 | 48..289 | 320 | 30.1 | Plus |
| CG2254-PA | 320 | CG2254-PA | 56..286 | 50..283 | 317 | 33.6 | Plus |
