BO19622.complete Sequence
1048 bp assembled on 2009-05-13
GenBank Submission: KX798052
> BO19622.complete
GAAGTTATCAGTCGACATGCCTGCCTTTATGCACCTCCTTCGCAACTTCA
TTCCCAAGTGGTGTCTCCCACGTCCAGAGAAGCATCTCCAGAACCACATA
TTCCGTCAGCTCCAGACGAATCACCCATCCGCCGCACTGGTGGCCATCAA
AACAAGTGAACAGGTGCTGCCCAAGTGCAGATTCATGCAGTACCGGCGCG
CCAATGAGCAGGTGAAGCGATTGGGCATGGTCTCCGAGGATGGCAGCAAG
ATGGCGGAGCTATCGAGCATGACCTGCGCCGCCCCCAATATGATGGACTT
CATCCAGCAGAGATACTGCATGGTTAGCCTGCTGGACAGTGTGCAATTCA
TGAAGATCGAGGATGTGGAGGCCGTGGATCTCCGCCTGCTGCCACCCATC
GATTCCCCCAGTAAGATCATTGGCGTGGACTGCAACTATGTGGATAACTG
TGATGAGCAGCACATCTCGATTCCGAGGGAGCCGAGTTTTCACGTCAAGT
TCGCCTCCTCGATAACCGGAGCTCTGGACAACATACGGGCGCATAGTTCG
GCCAAACACATTGACTATGGCTGCCAGTTGGCCGTGGTTATGGGCAAAAG
ATGCCGTGAAGTTTCGCCCAAAGAGGCTCTGAATCACGTATTTGGATTCA
TGGTGGTCCAGGACATCGTGGCAAGGGACTGGAATGTTCCGCTGGGCGGT
CACTCAATGGATACTTTCCTCCCACTGGGACCTACAATTGTGCACAGGTG
CCATGTGCCAGACTTAAACAATCTGTGGATTAAGACAATCATCAATGGCG
AGGAGCGCCAGACGGGCAATACCCGTAATATGATATTCAAGATCGACTTC
CTTATTCACCGCCTATCCCAATATTTAACTCTCTGTCCGGGCGACATTAT
ACTAACGGGAACACCCGCCGGATCGGGTGCATTTCGTCATCCGTCGTGCT
TTTTGAAGCCCGGTGATCTTATAGAGAGCGAAATTCAAAATTTGGGCAAA
ATGTGCAATAAAGTCGTTAATTCCTATTCTGCAAGCTTTCTAGACCAT
BO19622.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:37:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11251-RA | 1017 | CG11251-PA | 1..1014 | 17..1030 | 5070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:37:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11251-RA | 1389 | CG11251-RA | 142..1155 | 17..1030 | 5070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:37:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13088815..13089828 | 1030..17 | 5070 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:37:15 has no hits.
BO19622.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:01 Download gff for
BO19622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11251-RA | 142..1155 | 17..1032 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:20:17 Download gff for
BO19622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11251-RA | 142..1155 | 17..1032 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:52:03 Download gff for
BO19622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11251-RA | 142..1155 | 17..1032 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:52:03 Download gff for
BO19622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13088812..13089828 | 17..1032 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:20:17 Download gff for
BO19622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13081912..13082928 | 17..1032 | 99 | | Minus |
BO19622.pep Sequence
Translation from 16 to 1048
> BO19622.pep
MPAFMHLLRNFIPKWCLPRPEKHLQNHIFRQLQTNHPSAALVAIKTSEQV
LPKCRFMQYRRANEQVKRLGMVSEDGSKMAELSSMTCAAPNMMDFIQQRY
CMVSLLDSVQFMKIEDVEAVDLRLLPPIDSPSKIIGVDCNYVDNCDEQHI
SIPREPSFHVKFASSITGALDNIRAHSSAKHIDYGCQLAVVMGKRCREVS
PKEALNHVFGFMVVQDIVARDWNVPLGGHSMDTFLPLGPTIVHRCHVPDL
NNLWIKTIINGEERQTGNTRNMIFKIDFLIHRLSQYLTLCPGDIILTGTP
AGSGAFRHPSCFLKPGDLIESEIQNLGKMCNKVVNSYSASFLDH
BO19622.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:04:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11251-PA | 338 | CG11251-PA | 1..338 | 1..338 | 1801 | 100 | Plus |
| CG6028-PA | 293 | CG6028-PA | 5..291 | 53..334 | 648 | 45.8 | Plus |
| CG5793-PB | 220 | CG5793-PB | 12..217 | 128..333 | 249 | 31.3 | Plus |
| CG5793-PE | 220 | CG5793-PE | 12..217 | 128..333 | 249 | 31.3 | Plus |
| CG5793-PD | 220 | CG5793-PD | 12..217 | 128..333 | 249 | 31.3 | Plus |
