BO19624.complete Sequence
1003 bp assembled on 2009-05-13
GenBank Submission: KX795983
> BO19624.complete
GAAGTTATCAGTCGACATGGCTGTGCTACCACCAGATCCTGTATTCAGCC
TGCGCTCCCCCGACATGGGAGCCGTCAACTCTCTGTGTTTCCAGGAGAGC
GACCGATTGCTGGCGGGAACCATCAAAGGCAGCGTTTTCCTCTGGGATTT
GCAAACCAACCGCTCCGCTCTGCACTTTGAGGTGGGATCCGACCCCATAA
CCAGTCTGCACCACACCCCTGATCGCCTGGTGACCCAGGAGAAGGGCGGC
ACTATCACCATGTTCTCCATCGGCGGCAGTAGCTACGTTAAAGAGCGCAG
TATTCCAGGCAATCACCTGGGCTTTTGCCGATCTGCCTTGCACACGAACA
CCAGCAAGACCAACGAGCAGCTGCTCTTCTATCCCTGCGAGGAATCGTCC
ATCGGAGTGCTTCACGTTACGGATGCAGCGGCCCCCACGCAAATACTGGT
CCCAGATGATCCCCAACTGCCCAAACTGGGTAGCGTCACCTGCTTCAAGC
CCTTCGAGTGCGCCTCGCAACTGTTCCTGCTCGCTGGCTACGAATCGGGA
CACTTCCTCACCTGGGACATCAGCTCGAGCGTTATTTTGGATGTGATGGA
ATTGGCCCAAGATGCTACGTCTGTGGACTACGATCCAGTTACGAATCGTG
GCATTGTGGGTGGTCCAACCGACAAGTTGATTAGTTTCAGTTATCAGCGC
TCATCGATGCAAATGCAGCTCGGCTCGGAGCTGTGCATCAAGAATCCTGG
AGTGAATGGCGTTCGCATTCGGCCCGATCAGAAGGTGTTCGCCAGTGCCG
GCTGGGATGGTCGTATTCGGATCTTCTCGTGGAAAAGCCTGCGACCGCTG
GCCGTGCTTACGCAGCACAAGAATGGCGGCGTAATGGACTTGGCCTTCTC
CAGCCAACAGGTGGCCATGTGGCATGCTCCCATCATGGCAGCAGCGGGCA
TGGATGGCCAGATATCATTGTGGGACCTATACAACGCAAGCTTTCTAGAC
CAT
BO19624.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:08:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13192-RA | 972 | CG13192-PA | 1..969 | 17..985 | 4830 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:08:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13192-RA | 1343 | CG13192-RA | 72..1040 | 17..985 | 4830 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:08:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11825901..11826414 | 155..668 | 2570 | 100 | Plus |
| 2R | 25286936 | 2R | 11826478..11826794 | 669..985 | 1570 | 99.7 | Plus |
| 2R | 25286936 | 2R | 11825416..11825553 | 17..154 | 690 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:08:08 has no hits.
BO19624.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:59 Download gff for
BO19624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13192-RA | 1..969 | 17..987 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:05:05 Download gff for
BO19624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13192-RA | 72..1040 | 17..987 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:13:58 Download gff for
BO19624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13192-RA | 72..1040 | 17..987 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:13:58 Download gff for
BO19624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11825416..11825553 | 17..154 | 100 | -> | Plus |
| 2R | 11825901..11826414 | 155..668 | 100 | -> | Plus |
| 2R | 11826478..11826794 | 669..987 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:05:05 Download gff for
BO19624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7712921..7713058 | 17..154 | 100 | -> | Plus |
| arm_2R | 7713406..7713919 | 155..668 | 100 | -> | Plus |
| arm_2R | 7713983..7714299 | 669..987 | 99 | | Plus |
BO19624.pep Sequence
Translation from 16 to 1003
> BO19624.pep
MAVLPPDPVFSLRSPDMGAVNSLCFQESDRLLAGTIKGSVFLWDLQTNRS
ALHFEVGSDPITSLHHTPDRLVTQEKGGTITMFSIGGSSYVKERSIPGNH
LGFCRSALHTNTSKTNEQLLFYPCEESSIGVLHVTDAAAPTQILVPDDPQ
LPKLGSVTCFKPFECASQLFLLAGYESGHFLTWDISSSVILDVMELAQDA
TSVDYDPVTNRGIVGGPTDKLISFSYQRSSMQMQLGSELCIKNPGVNGVR
IRPDQKVFASAGWDGRIRIFSWKSLRPLAVLTQHKNGGVMDLAFSSQQVA
MWHAPIMAAAGMDGQISLWDLYNASFLDH
BO19624.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:04:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13192-PA | 323 | CG13192-PA | 1..323 | 1..323 | 1696 | 100 | Plus |
