BO19627.complete Sequence
1075 bp assembled on 2009-05-13
GenBank Submission: KX794654
> BO19627.complete
GAAGTTATCAGTCGACATGCTGTTGCCGGAGCTGCTGCTACTCGGCTTGG
CCGTCTCCCTGGCGGACAGCTACGACCGAAGCGTCAACTACTGGGAGGCC
TTTGCGCCCGGCAAGCTGCTCCAGCGCCTGGACGCTCTCACCGTCACGGA
TGTGGACCAATCGAAGGTGGTCAAACTGCCGCAGTTGATGCAGCCCATCC
TGCCAGCCAACGAAGCGCAGGCCAAGGTGGATGAGGACGTGGACGTGGAT
GTTGAGACGGATGCAGAGGCGGCGGCCGTTGACGATGTGGACAGCCTTAG
TGCGGAGACCAGCCACGAGGGCTACTCCGGCGAGGACAACTACGAGCGCA
ACTACGAGCAGTTCGTCAAGGAGTACTTCGATCGGGCTGCCGACGACGAT
GACCACGACGAAGGCGAAGGCCTGGTGGAGGAGGAGGAGGAGGAGACCCA
GGCGGAGGCCACCAATGTCAGGGATCAGCGCTGCCGGCAGGTCAAACGGA
AGGATGGCCAGCTGTGCGAGATCTGTCGCCAGTTGAAGAACAACGAGGTG
TCCGAAACGTGTAGCTACTCGCACGACGACCAACCGCAGCAGTACGCCTA
TGGCAGCGGCAGCCAGTACAAGCGTTACCGCGACGATCCCGCACAGAAGG
CGGATCAGGAGCAGGCCGAGCCGGTGGCGCCCAGCAGCCTGTGCGTGCGC
CGCCAGCAGAAGAACAGCGTCTGCTACGAGTGCAAGGACAGCAAGGGCCA
GAAGATCGAACGCTGCTACGATGTGCAGGCCCGCAAGGCCAAGACCCGAA
AGACGAAGGCCTCCTCCACCCGTCATCCGTCCAGCTCCGTTCACAAACGT
AAGCCGCGTTCCCAGCAGTCGCAGCAGTCGGAGCAGGAGCAGCGCATCTA
CAAGCGCACCATTAGCTACAGCTATGCCCAGGGCACGGATCAGCAGGGGC
CGCGGTCGGAGCAGCCGGCCGGCGGGACAACGGAGCTGCCAGTGCCACGC
CAGCGTCGCCGGCGGCTGGTGAAGATTACGCGTCGGCGCGGACCGGCTAA
AGTGCAAGCAAGCTTTCTAGACCAT
BO19627.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:38:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32537-RB | 1044 | CG32537-PB | 1..1041 | 17..1057 | 5175 | 99.8 | Plus |
| CG32537-RA | 1044 | CG32537-PA | 1..1041 | 17..1057 | 5175 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:38:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32537-RB | 1817 | CG32537-RB | 338..1378 | 17..1057 | 5175 | 99.8 | Plus |
| CG32537-RA | 2442 | CG32537-RA | 963..2003 | 17..1057 | 5175 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:38:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19273788..19274828 | 1057..17 | 5175 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:38:46 has no hits.
BO19627.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:48 Download gff for
BO19627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32537-RA | 963..2003 | 17..1059 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:30 Download gff for
BO19627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32537-RA | 963..2003 | 17..1059 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:15:56 Download gff for
BO19627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32537-RA | 963..2003 | 17..1059 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:15:56 Download gff for
BO19627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19273786..19274828 | 17..1059 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:30 Download gff for
BO19627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19167819..19168861 | 17..1059 | 99 | | Minus |
BO19627.pep Sequence
Translation from 16 to 1075
> BO19627.pep
MLLPELLLLGLAVSLADSYDRSVNYWEAFAPGKLLQRLDALTVTDVDQSK
VVKLPQLMQPILPANEAQAKVDEDVDVDVETDAEAAAVDDVDSLSAETSH
EGYSGEDNYERNYEQFVKEYFDRAADDDDHDEGEGLVEEEEEETQAEATN
VRDQRCRQVKRKDGQLCEICRQLKNNEVSETCSYSHDDQPQQYAYGSGSQ
YKRYRDDPAQKADQEQAEPVAPSSLCVRRQQKNSVCYECKDSKGQKIERC
YDVQARKAKTRKTKASSTRHPSSSVHKRKPRSQQSQQSEQEQRIYKRTIS
YSYAQGTDQQGPRSEQPAGGTTELPVPRQRRRRLVKITRRRGPAKVQASF
LDH
BO19627.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:03:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32537-PB | 347 | CG32537-PB | 1..347 | 1..347 | 1799 | 100 | Plus |
| CG32537-PA | 347 | CG32537-PA | 1..347 | 1..347 | 1799 | 100 | Plus |
