Clone BO19632 Report

Search the DGRC for BO19632

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:196
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptTask7-RA
Protein status:BO19632.pep: Imported from assembly
Sequenced Size:1054

Clone Sequence Records

BO19632.complete Sequence

1054 bp assembled on 2009-05-13

GenBank Submission: KX796948

> BO19632.complete
GAAGTTATCAGTCGACATGATGAAGCGACAGAATGTCCGTACCCTTTCCC
TGGTGGTATGCACTTTCACCTATCTTTTAATTGGAGCCGCCGTGTTCGAT
TCCCTGGAGTCACCAACGGAGGCCAAAAGATGGGAATTCCTACAGACCGT
TAAGAACAACTTTGTTAGAAAGTACAATGTGACTGACGAGGATTTCCGTG
TGATGGAAATCGTCATCATTGAAAATAAGCCCCACAAGGCCGGACCTCAG
TGGAAATTCGCTGGAGCTTTCTATTTCAGCACGGTTGTACTGGCAATGAT
AGGATATGGTCATTCTACGCCAGTTACAATTCCGGGAAAAGCATTTTGTA
TGGGCTATGCTATGGTGGGCATCCCGCTGGGTCTGGTGATGTTCCAGTCT
ATCGGAGAACGTCTGAATAAGTTTGCATCCGTGATAATAAGGCGGGCAAA
GAGAGCCAGTGGAGCTCGCTGTACGGATGCCACCGAAATGAATCTCATGT
TGGCCACCGGAATGCTCTCCTCCATAATAATCACCACTGGAGCAGCAGTC
TTTTCCCGATACGAGGGTTGGAGCTACTTCGATAGCTTCTACTATTGTTT
TGTCACCTTGACGACAATTGGTTTCGGCGATTATGTGGCATTGCAGAACG
ACCAAGCTCTAACTAATAAGCCTGGCTATGTGGCGCTGAGCTTGGTCTTC
ATCCTATTCGGCTTGGCCGTGGTGGCCGCCAGTATCAATCTATTGGTGCT
CCGATTCATGACCATGCAAGCAGAGGATGCCAAGAGAGATGAGCAGGATG
CTCAGAACTTGGCTGGAAATGCCCAGCCGGTGACCTTCGATGATGAGTCC
ACGTACAATATGCACGGCAAGCTGCTGGAGAACAACTACACAACGGAGAA
CGATGAGACCGCCTCCCTGTGTTCCTGCACCTGCATGGGTGGCACCAGGT
GCCTGAATCATGAGCAGTTCGTGGACCCGGACTTTCAGCCTACCGACATT
ATCGAGAGCACCTTGTGCCTGAAGCGAGCCTCCGTCGCAAGCTTTCTAGA
CCAT

BO19632.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:51:19
Subject Length Description Subject Range Query Range Score Percent Strand
Task7-RA 1023 CG9361-PA 1..1020 17..1036 5100 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:51:20
Subject Length Description Subject Range Query Range Score Percent Strand
Task7-RA 1727 CG9361-RA 277..1296 17..1036 5100 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:51:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9411085..9411487 766..364 2015 100 Minus
3R 32079331 3R 9410760..9411030 1036..766 1355 100 Minus
3R 32079331 3R 9411668..9411824 303..147 785 100 Minus
3R 32079331 3R 9411888..9412017 146..17 650 100 Minus
3R 32079331 3R 9411539..9411605 366..300 335 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:51:17 has no hits.

BO19632.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:45 Download gff for BO19632.complete
Subject Subject Range Query Range Percent Splice Strand
Task7-RA 1..1020 17..1038 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:32:50 Download gff for BO19632.complete
Subject Subject Range Query Range Percent Splice Strand
Task7-RA 277..1296 17..1038 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:39:15 Download gff for BO19632.complete
Subject Subject Range Query Range Percent Splice Strand
Task7-RA 277..1296 17..1038 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:39:15 Download gff for BO19632.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9410757..9411030 766..1038 99 <- Minus
3R 9411086..9411486 365..765 100 <- Minus
3R 9411541..9411602 303..364 100 <- Minus
3R 9411669..9411824 147..302 100 <- Minus
3R 9411888..9412017 17..146 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:32:50 Download gff for BO19632.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5237391..5237546 147..302 100 <- Minus
arm_3R 5237610..5237739 17..146 100   Minus
arm_3R 5236479..5236752 766..1038 99 <- Minus
arm_3R 5236808..5237208 365..765 100 <- Minus
arm_3R 5237263..5237324 303..364 100 <- Minus

BO19632.pep Sequence

Translation from 16 to 1054

> BO19632.pep
MMKRQNVRTLSLVVCTFTYLLIGAAVFDSLESPTEAKRWEFLQTVKNNFV
RKYNVTDEDFRVMEIVIIENKPHKAGPQWKFAGAFYFSTVVLAMIGYGHS
TPVTIPGKAFCMGYAMVGIPLGLVMFQSIGERLNKFASVIIRRAKRASGA
RCTDATEMNLMLATGMLSSIIITTGAAVFSRYEGWSYFDSFYYCFVTLTT
IGFGDYVALQNDQALTNKPGYVALSLVFILFGLAVVAASINLLVLRFMTM
QAEDAKRDEQDAQNLAGNAQPVTFDDESTYNMHGKLLENNYTTENDETAS
LCSCTCMGGTRCLNHEQFVDPDFQPTDIIESTLCLKRASVASFLDH

BO19632.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:02:57
Subject Length Description Subject Range Query Range Score Percent Strand
Task7-PA 340 CG9361-PA 1..340 1..340 1765 100 Plus
Task6-PE 397 CG9637-PE 1..311 2..314 914 56 Plus
Task6-PD 397 CG9637-PD 1..311 2..314 914 56 Plus
Task6-PF 408 CG9637-PF 1..311 2..314 914 56 Plus
Task6-PC 408 CG9637-PC 1..311 2..314 914 56 Plus