BO19636.complete Sequence
751 bp assembled on 2009-05-13
GenBank Submission: KX794772
> BO19636.complete
GAAGTTATCAGTCGACATGACAACTGCCGAATTGCAAGGTTCCTATGGAG
GCCTCTACTTTGGCTTCTGCACACTGATCTCGCATGTGCTTCTGGCGGGG
ATCACCGTAGCCATTGTTTACAAGTGTCTGGTGCTCAAATTGGTGCACAC
CGCCGGACATGCCTTCTACTGCACAATCGGCTTTGTGTTTTTCATGGGCG
AAGCATTGCTGGTCCGGAATAGCGCATATTTGGAGTCCTCGTTGGGTCCA
TTGAACCTCAACCGCCTGCACGCCGTCCTGGGGCTGTTGGCATTCCTGGT
CGGAGCCGGCGGAATCGGAATCAAGACATGGCAGAAGCTGGAGCGCAAAC
GGGAAGACCCCAATGCCACCGTTCGTCACTTTAAGAGCAACCATGCTTTT
TACGGTATAATCGGTTGTGCTCTTCTTCTGGGTAGCGTTCTGAGCGGTCT
TCCGCTGTATTTCATCAACAGTGGCTTCGCCTTGAAAATGCTTCATCGAT
TTTTCGGATTGTCCGGATTCCTCGTTCTGATGGTATCTCAAATGTTCGGA
TATAACACGGGATTCGGTCGGCGACAGTGGAAGGCACACCACCAGAAGCT
CTTCAAATTTTTCACATTTATTGCCACCATTACGACTGCAAATTACGAAC
TCCGGAGATTTGTGCGAGATGTTGCCGGCTTGGCGACAGACTATTTTATT
GGATCAGATGCAGCAGAAGCTAGAGAAGATCTTGCAAGCTTTCTAGACCA
T
BO19636.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:07:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10337-RA | 720 | CG10337-PA | 1..717 | 17..733 | 3585 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:07:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10337-RA | 1297 | CG10337-RA | 149..865 | 17..733 | 3585 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 02:07:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19545808..19546137 | 733..404 | 1650 | 100 | Minus |
| 2L | 23513712 | 2L | 19546201..19546425 | 406..182 | 1125 | 100 | Minus |
| 2L | 23513712 | 2L | 19546647..19546811 | 181..17 | 825 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 02:07:29 has no hits.
BO19636.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:51 Download gff for
BO19636.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10337-RA | 104..820 | 17..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:09:59 Download gff for
BO19636.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10337-RA | 149..865 | 17..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:37:53 Download gff for
BO19636.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10337-RA | 149..865 | 17..735 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:37:53 Download gff for
BO19636.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19545805..19546136 | 405..735 | 99 | <- | Minus |
| 2L | 19546203..19546425 | 182..404 | 100 | <- | Minus |
| 2L | 19546647..19546811 | 17..181 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:09:59 Download gff for
BO19636.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19545805..19546136 | 405..735 | 99 | <- | Minus |
| arm_2L | 19546203..19546425 | 182..404 | 100 | <- | Minus |
| arm_2L | 19546647..19546811 | 17..181 | 100 | | Minus |
BO19636.pep Sequence
Translation from 16 to 751
> BO19636.pep
MTTAELQGSYGGLYFGFCTLISHVLLAGITVAIVYKCLVLKLVHTAGHAF
YCTIGFVFFMGEALLVRNSAYLESSLGPLNLNRLHAVLGLLAFLVGAGGI
GIKTWQKLERKREDPNATVRHFKSNHAFYGIIGCALLLGSVLSGLPLYFI
NSGFALKMLHRFFGLSGFLVLMVSQMFGYNTGFGRRQWKAHHQKLFKFFT
FIATITTANYELRRFVRDVAGLATDYFIGSDAAEAREDLASFLDH
BO19636.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:03:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10337-PA | 239 | CG10337-PA | 1..239 | 1..239 | 1241 | 100 | Plus |
| CG3592-PA | 249 | CG3592-PA | 30..231 | 13..222 | 298 | 36.7 | Plus |
