BO19639.complete Sequence
1591 bp assembled on 2009-05-13
GenBank Submission: KX793896
> BO19639.complete
GAAGTTATCAGTCGACATGCGCCTACGATATTGCTGGCTGACTCTCTCCC
TTTGCCTGCTTCTGCAACACGATCGTGCCCAGGCTGCCAACATCCTGGGT
ATATTTCCCTACCGCCACATTTCACCCTTTTTTGTGATGCAGCCTTTGGT
GCGGACTTTGGCAACGAGAGGGCACAATGTGACTCTAATTACACCGATCG
GAATGCCAAACGATATCGAGGGAGTTCGACATATACGTGTTGCCCAGCTT
AACGAACGTATAAAAGAAATGCTTGAGTCTGACCAAGTTCTGGACTTTAT
GATTAACAAATGGACGGAGAGCGCTCTTACGGCAAAGGCGCTCTTTAATG
CCTCCAATGACATTCTAAGTGATCCTGGCGTTCAAAGGATGCTGCATGAC
AAAAGCGAAAGTTTTGACTTGATCATCATGGAACCATCTAGTCTGGACGC
CCTTTATGGCCTGGTTGAGTTCTACAACGCCACGCTGATGGGATTGTCCA
GTATACGGATTAACTGGCACACATACGAATTGGCAGGAAATCCAGCTCCA
TCAATATACGAACCCATTTCTCCGGTCGGCTTTTCCTTGGAAACATCATT
GTTCAGTCGCGTATATAACTGGATTCATATAATGGAAGAAAAATTGGTGA
ACTATTTGATCTTACGACCTGCTCAACTACACTTATTTCAGAAATTTTTT
GGCTATTCCGCTCAGAAAATGAATGAGTTAAGATCCAGATTCTCGTTGAT
GCTAATCAATAGCCACTACAGCATGGGTAAAGTTCGAGCCAATGCACCAA
ACATAATCGAGGTGGGAGGTCTTCATCTCAGCGAGCCCCCTGAACCAAGT
GATGAGGAGCTGCAGAAATTTCTGGACAAGGCCGATCACGGAGTTATTTA
CTTCTCGATGGGCAACGACATTCTGATTAAGTTTCTTCCTGAAAACATTC
AGGAGCTACTGCTGCAGACTTTTGCTACGCTAAATGAAAGTATTATTTGG
AAGAGCGAACTATTATATATGCCTGACAAATCGGATAATGTATATGTTGT
TGAACAAGCCCCTCAGCGACATATATTGAACCATCCAAATGTCCGACTTT
TCATCACAAACGGGGGATTACTGAGTGTGATTGAGGCCGTAGACAGTGGA
GTTCCAATGCTTGGACTACCGATGTTTTTCGACCAATTTGGTAATATGCG
TTGGGTGCAATTATCTGGAATGGCTGAGGTTATGGATATCAACTCTCTGA
ACAAAGATACTCTAACCGAAACCATAAAGCATATGCTTGCAAATAACAGC
TATTATCTGAAAGCGAAGGAAATATCGCAATTTTTCAAGGATCGTCCCAT
GAGTCCATTGGATACGGCGGTTTGGTGGACTGAGTACGCCTTACGAAACC
GGAATATTACTCGGATGCGCCTTAACTTGGAGGAGATTCCACTGATTGAG
TACTATAGAATTGACAGTATTTTAGCATTCAGTCTACGATTTGGATTAGT
CGCTGCATCGCTGATCTTTTTGGTCTACACCCTGTTTCTGAAATATCGTA
TCAGACTAAGACGATTGCATCCAGCAAGCTTTCTAGACCAT
BO19639.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:22:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16732-RA | 1560 | CG16732-PA | 1..1557 | 17..1573 | 7785 | 100 | Plus |
| CG16732-RB | 1551 | CG16732-PB | 1..1548 | 17..1573 | 7615 | 99.4 | Plus |
| CG10168-RA | 1623 | CG10168-PA | 725..1513 | 735..1523 | 495 | 70.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:22:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16732-RA | 1758 | CG16732-RA | 26..1582 | 17..1573 | 7785 | 100 | Plus |
| CG16732-RB | 1749 | CG16732-RB | 26..1573 | 17..1573 | 7615 | 99.4 | Plus |
| CG10168-RA | 1856 | CG10168-RA | 912..1700 | 735..1523 | 495 | 70.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:22:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23535076..23536384 | 1573..265 | 6545 | 100 | Minus |
| 3R | 32079331 | 3R | 23536436..23536685 | 266..17 | 1250 | 100 | Minus |
| 3R | 32079331 | 3R | 23537149..23537937 | 1523..735 | 495 | 70.8 | Minus |
| 3R | 32079331 | 3R | 23533279..23533913 | 1390..756 | 280 | 69.6 | Minus |
Blast to na_te.dros performed 2014-11-28 00:22:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 1360 | 3409 | 1360 1360 3409bp | 949..988 | 248..287 | 119 | 77.5 | Plus |
BO19639.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:41:13 Download gff for
BO19639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16732-RA | 1..1557 | 17..1575 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:51:01 Download gff for
BO19639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16732-RA | 26..1582 | 17..1575 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:19:24 Download gff for
BO19639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16732-RA | 26..1582 | 17..1575 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:19:24 Download gff for
BO19639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23535073..23536382 | 267..1575 | 99 | <- | Minus |
| 3R | 23536436..23536685 | 17..266 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:51:01 Download gff for
BO19639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19360795..19362104 | 267..1575 | 99 | <- | Minus |
| arm_3R | 19362158..19362407 | 17..266 | 100 | | Minus |
BO19639.pep Sequence
Translation from 16 to 1591
> BO19639.pep
MRLRYCWLTLSLCLLLQHDRAQAANILGIFPYRHISPFFVMQPLVRTLAT
RGHNVTLITPIGMPNDIEGVRHIRVAQLNERIKEMLESDQVLDFMINKWT
ESALTAKALFNASNDILSDPGVQRMLHDKSESFDLIIMEPSSLDALYGLV
EFYNATLMGLSSIRINWHTYELAGNPAPSIYEPISPVGFSLETSLFSRVY
NWIHIMEEKLVNYLILRPAQLHLFQKFFGYSAQKMNELRSRFSLMLINSH
YSMGKVRANAPNIIEVGGLHLSEPPEPSDEELQKFLDKADHGVIYFSMGN
DILIKFLPENIQELLLQTFATLNESIIWKSELLYMPDKSDNVYVVEQAPQ
RHILNHPNVRLFITNGGLLSVIEAVDSGVPMLGLPMFFDQFGNMRWVQLS
GMAEVMDINSLNKDTLTETIKHMLANNSYYLKAKEISQFFKDRPMSPLDT
AVWWTEYALRNRNITRMRLNLEEIPLIEYYRIDSILAFSLRFGLVAASLI
FLVYTLFLKYRIRLRRLHPASFLDH
BO19639.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:24:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16732-PA | 519 | CG16732-PA | 1..519 | 1..519 | 2684 | 100 | Plus |
| CG16732-PB | 516 | CG16732-PB | 1..516 | 1..519 | 2653 | 99.2 | Plus |
| CG10170-PA | 539 | CG10170-PA | 1..517 | 1..515 | 1635 | 59.2 | Plus |
| CG10168-PA | 540 | CG10168-PA | 1..519 | 1..517 | 1629 | 59 | Plus |
| Ugt86Dh-PB | 526 | CG4772-PB | 12..522 | 8..514 | 1075 | 42.1 | Plus |
