BO19644.complete Sequence
1318 bp assembled on 2009-05-13
GenBank Submission: KX800069
> BO19644.complete
GAAGTTATCAGTCGACATGTCCGACAACGATGATATCGTAAACCCCAATG
AGCACCTGATTATTCCGGATTGGATCAATGAAAAGTATTTCGAGAGTGTA
CTGGCCAAGGACGAACCCGATCATGTCAAGGTCCTGAAGTTCACGGTAGT
GGCGGCGATTCCGCCGGGCGAAAATTTCACTTCGACCATGCTAAGGGTTT
ATATCAAACTGGAAATGAAAGATGGTAGTGTCAAGACCAAAACATACATT
TTCAAGACGATGCTGCCCGAGGAGCGAGGAGGCAGCGACATCAACGAGTT
TGGCCTCTTTCCCAAGGAGGCAATGATGTACAAGACATACCTTCCTGCAT
TCGAAGCCCTATACAAGGATGTCGGTTGGGACATTCAGTTGGCGCCCAAG
TGCCTGCACACCGAGGAGCGTGAGGGTGACATCCATTTCATCTTCGAGGA
TCTGTGCGTTAAGAGGTTTAAGAACATGGATCGCACGAAGGGCCTGGACA
TGGAGCACATGACCAAGTGCCTGCAAAAGCTGGCCGAGTATCATGCGGCC
AGTGCGGTTTACGAGGAGCTGCATGGTCCCTATCCCAGCGAGTTCAGTGA
GGGATTCGTTAAGAAGGATGTGAAAAAATTCCACGTCGATGGGTTCCAGC
TGAAGGAGAAGGCCTACAAGAAGGCAATGCTCTCGTGGGGTTTGAAAGAC
GCCGATAAATATATTAAGGCATTTCCCACTGTTAAGCAATATTGGGCGCA
ATGTCTTAGTACTTTGGAATTAAATCCCGATGAATTTCATGTGCTTAACC
ACGGCGACTTTTGGTCGAGCAATCTGATGAGCAGCTATCTGCCGGACGGA
ACTCTCGAGAAGCTGATACTAATCGACTTCCAGATTGTCATGTGGGGTAG
TCCGGCCATGGACCTGCTTTTCTTTCTCACCCTCTCCCCCACCAACGATT
TGCGCATCAAGGAGTTCGACCATTTTGTAAGGATATACTGGGAACGTCTG
GTCGAGTGCTTGAAGGTTTTGAAGCTGAAAAAGCCCCTGCCAAAACTTCG
TGATCTTCAAAACTCCATGAACAATAAGAACCACTCCTTTTATGCTTTCT
TCAGCATCCTGAACCACCTGCCCATTATTCTCTTCCCCACCGACAAGGAC
AGCAACATACACAACTTATCCGCTAATACGGAGGAAGGAGAAAATTATAG
ACTACGTTTGCTCTCAAATCCCGCCTTTGGAAACGTTATGAAGGATCTGT
ACCCCTTCTTGTATAACCGTGGAATACTGAACTTTGAGGACTACGATGTC
GCAAGCTTTCTAGACCAT
BO19644.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:56:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31288-RA | 1287 | CG31288-PA | 1..1284 | 17..1300 | 6420 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:56:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31288-RA | 1377 | CG31288-RA | 58..1341 | 17..1300 | 6420 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:56:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25298701..25299205 | 724..220 | 2525 | 100 | Minus |
| 3R | 32079331 | 3R | 25298268..25298637 | 1094..725 | 1850 | 100 | Minus |
| 3R | 32079331 | 3R | 25297996..25298202 | 1300..1094 | 1035 | 100 | Minus |
| 3R | 32079331 | 3R | 25299296..25299500 | 221..17 | 1025 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:56:20 has no hits.
BO19644.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:41:11 Download gff for
BO19644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31288-RA | 58..1341 | 17..1302 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:03:06 Download gff for
BO19644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31288-RA | 58..1341 | 17..1302 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:29:02 Download gff for
BO19644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31288-RA | 58..1341 | 17..1302 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:29:02 Download gff for
BO19644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25298268..25298637 | 725..1094 | 100 | <- | Minus |
| 3R | 25297993..25298201 | 1095..1302 | 99 | <- | Minus |
| 3R | 25298701..25299203 | 222..724 | 100 | <- | Minus |
| 3R | 25299296..25299500 | 17..221 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:03:06 Download gff for
BO19644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21123715..21123923 | 1095..1302 | 99 | <- | Minus |
| arm_3R | 21123990..21124359 | 725..1094 | 100 | <- | Minus |
| arm_3R | 21124423..21124925 | 222..724 | 100 | <- | Minus |
| arm_3R | 21125018..21125222 | 17..221 | 100 | | Minus |
BO19644.pep Sequence
Translation from 16 to 1318
> BO19644.pep
MSDNDDIVNPNEHLIIPDWINEKYFESVLAKDEPDHVKVLKFTVVAAIPP
GENFTSTMLRVYIKLEMKDGSVKTKTYIFKTMLPEERGGSDINEFGLFPK
EAMMYKTYLPAFEALYKDVGWDIQLAPKCLHTEEREGDIHFIFEDLCVKR
FKNMDRTKGLDMEHMTKCLQKLAEYHAASAVYEELHGPYPSEFSEGFVKK
DVKKFHVDGFQLKEKAYKKAMLSWGLKDADKYIKAFPTVKQYWAQCLSTL
ELNPDEFHVLNHGDFWSSNLMSSYLPDGTLEKLILIDFQIVMWGSPAMDL
LFFLTLSPTNDLRIKEFDHFVRIYWERLVECLKVLKLKKPLPKLRDLQNS
MNNKNHSFYAFFSILNHLPIILFPTDKDSNIHNLSANTEEGENYRLRLLS
NPAFGNVMKDLYPFLYNRGILNFEDYDVASFLDH
BO19644.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:23:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31288-PA | 428 | CG31288-PA | 1..428 | 1..428 | 2292 | 100 | Plus |
| CG31097-PB | 420 | CG31097-PB | 2..420 | 6..426 | 1152 | 49.9 | Plus |
| CG10550-PD | 425 | CG10550-PD | 11..422 | 8..421 | 928 | 42.5 | Plus |
| CG10550-PC | 425 | CG10550-PC | 11..422 | 8..421 | 928 | 42.5 | Plus |
| CG10550-PB | 425 | CG10550-PB | 11..422 | 8..421 | 928 | 42.5 | Plus |
