BO19652.complete Sequence
1717 bp assembled on 2009-05-13
GenBank Submission: KX796018
> BO19652.complete
GAAGTTATCAGTCGACATGAATCCAAACGATACTTTATCAGCCTTCTCAC
TTCTCTTGTGCGTCCTGATTCTTTCCGCTGGACGCGGCGAATTACTTTTT
AATGCGGATGACAATGTGGTGCAGCTGGATTTTGCATCATTCGAGTCCGG
ACTTAGTGAACCAACGTCTGGGAAACTGGTGCAGTTCTTTAACGGATTCT
GCGAGGAGAGCCAGAACTTTATACCAGCGTTTAAGAATCTATCTCGTAAA
CTTTACAAGTGGCACCGATTACTCAAAGTCCATGTACTAGATTGTGGAAA
GGATGAGAACGATATGATATGTAGCATTTACAGCATTCGTAAAACGCCAA
CTCTGCGATATTTTCCACCGAGTTATAAGCTAGCACCAGACAACCTGGGT
ACCGAGATCACTCATCGAAATCCCAAAGAGATACAATCGAAGCTGGCCCT
AAATCTTCAAAAGCTTGATTACTTCAAAATGTTTAAGCGGCAGGACAATG
TGGCTCATATATTTCAAACGCACAAGGATATCGAGTACGTTGCTTTTGTT
TTCCAAATGTGTTTAGACCACTTTCTGCCGCACTTGGAAACGGGCAACTC
GATGGAGGAAAAGTATGCCTCTCAGGGCGATTGCAATGAGGATAATCCAA
TAGTTTCGTTGATCGGAAGAAATACCCTTCTTGAATTGCTGCCCTACAGG
AAAGTGGTTGTGCGGATCTTCGACAATCATGATGTTTACAACAAATTTGG
CATATCGCCCGTACCCAACTTAGTGGTTCTGGTAAATAAAGCTGGAAAAC
TGCTATTTCTCACACCCGAGATGGATAGCAGTAAGGCTTATGTGGCTGCC
ATTAAGCAATTCTTGATCTTTGTCGACCTTAAGCCCCAGAAACCGTTGCC
AAAAACCCCACCCGCCAACATAAGTGAAGCTTTAAGGTATGAGATATTCG
AGCAGCACAAGCATCATCCCTCTCGGATCTATCGAGCCGATCTGGAACGG
GCTATCGATCAAATCCTTAATGTAAAGTTCCCAGGAACTACGCACTTTGC
CGGAGCAAAGATAGTTGTTCTGCGAAATTTCGTTAAACTGATATACAACT
CAAGTCCCTTGAAGCCAGAGGCGCGGGAAAAGCTGGCAAACCTCTATTAT
TCCCTGCACGTGAAAAAGCAACTTTCCGGAGTGGGATTCAAAAATTTGCT
GCTAAAATCAGTAAAGGATTACGTGTTTGATGGAAAGCAATATGTTGGTT
GTATTGCCTCTCGTCCTTCGTTGCGCGGCTTTAATTGCTCCCTTTGGGTT
CTATTCCATTATCTTAGTGTGGAGTCGAAAAAGCTTAAGCCCAAATCCGT
GTTGTTAGTATTTCTCGGATATGTACGATTCTTTATGAACTGCAAGGAGT
GTGATATGAAAATAAGCGAGTTCAAAAAGCTCCGACCAATTGCAAATGTG
ACCAATGATGATGAACAGATTTTGTGGCTCTGGGAAGCGCATAATTATGT
CAACAAACAGTTGGCCGGCGATTCTACAGAGGATCCGAAATTCCCAAAGA
TTCAGTTTCCAAGCGAAAGAGATTGTCCCAAGTGTAGAAACAACGCGACC
GAATGGCGCACCGAAGAAGTATTGCACTATCTGAAAGGCATATATACCTT
AAAAAACCTTAGTTGGTTCGGAATGTCATCCGGAAAACATGCAATTGAAG
CAAGCTTTCTAGACCAT
BO19652.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:29:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31413-RA | 1686 | CG31413-PA | 1..1683 | 17..1699 | 8400 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:29:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31413-RA | 1782 | CG31413-RA | 30..1712 | 17..1699 | 8400 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:29:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23702790..23704472 | 17..1699 | 8400 | 99.9 | Plus |
Blast to na_te.dros performed 2014-11-27 13:29:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 2027..2105 | 517..440 | 113 | 63.7 | Minus |
BO19652.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:41:01 Download gff for
BO19652.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31413-RA | 30..1712 | 17..1701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:51:08 Download gff for
BO19652.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31413-RA | 30..1712 | 17..1701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:19:30 Download gff for
BO19652.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31413-RA | 30..1712 | 17..1701 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:19:30 Download gff for
BO19652.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23702790..23704472 | 17..1701 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:51:08 Download gff for
BO19652.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19528512..19530194 | 17..1701 | 99 | | Plus |
BO19652.pep Sequence
Translation from 16 to 1717
> BO19652.pep
MNPNDTLSAFSLLLCVLILSAGRGELLFNADDNVVQLDFASFESGLSEPT
SGKLVQFFNGFCEESQNFIPAFKNLSRKLYKWHRLLKVHVLDCGKDENDM
ICSIYSIRKTPTLRYFPPSYKLAPDNLGTEITHRNPKEIQSKLALNLQKL
DYFKMFKRQDNVAHIFQTHKDIEYVAFVFQMCLDHFLPHLETGNSMEEKY
ASQGDCNEDNPIVSLIGRNTLLELLPYRKVVVRIFDNHDVYNKFGISPVP
NLVVLVNKAGKLLFLTPEMDSSKAYVAAIKQFLIFVDLKPQKPLPKTPPA
NISEALRYEIFEQHKHHPSRIYRADLERAIDQILNVKFPGTTHFAGAKIV
VLRNFVKLIYNSSPLKPEAREKLANLYYSLHVKKQLSGVGFKNLLLKSVK
DYVFDGKQYVGCIASRPSLRGFNCSLWVLFHYLSVESKKLKPKSVLLVFL
GYVRFFMNCKECDMKISEFKKLRPIANVTNDDEQILWLWEAHNYVNKQLA
GDSTEDPKFPKIQFPSERDCPKCRNNATEWRTEEVLHYLKGIYTLKNLSW
FGMSSGKHAIEASFLDH
BO19652.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:23:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31413-PA | 561 | CG31413-PA | 1..561 | 1..561 | 2967 | 100 | Plus |
| CG17843-PA | 552 | CG17843-PA | 7..545 | 11..553 | 970 | 37.9 | Plus |
| CG6690-PA | 562 | CG6690-PA | 35..540 | 27..549 | 803 | 34 | Plus |
| CG4670-PB | 637 | CG4670-PB | 44..570 | 27..553 | 625 | 28.2 | Plus |
| CG4670-PA | 637 | CG4670-PA | 44..570 | 27..553 | 625 | 28.2 | Plus |
