BO19657.complete Sequence
715 bp assembled on 2009-05-13
GenBank Submission: KX794508
> BO19657.complete
GAAGTTATCAGTCGACATGTTTCTGTCCATCGCCCCGCCCCTAATGGACT
TCGAGGACGAGCTGCTCTGGATAAACCAGTCGAACAGCGACAAGGTGGAG
ATCATCTACGACAAGTCCAACTACATTACCCCCAACATAAAGCACCTCAT
CGAGCAGGCTTTTCTCCAGCCACTCAGCCTCCAGAACCAGCACATCCTCT
TCGACGACCTGCTGAAGCAGAACACGGACATTGCGCGCCAATATGGACTG
ACCCCGGACAAGCTACCTCTGCTCGTGGAAAGCAATCCTCTCATCTCCAT
TGAGATCTTGCTAAGACTGATGACGACCTCCGACATAACTGAATACTTCA
ACGTGTTGGTCAACATGGACATAACACTTCACTCCATGGAGGTGGTCAAC
CGACTAACCACCTCCGGACCTTTGCCCACTGAGTTTATTCACCTATACAT
CAGCAATTGCATCTCGACTTGCGAAACAGTCAAGGACAAGTACATGCAGT
CTCGCCTGGTGCGACTCGTTTGCGTATTTCTGCAGTCCTTGATTAGGAAC
AAGATTGTGAACGTTAGGGAACTATTCATTGAAATCGAAGCCTTCTGCGT
GGGTTTCAGCAAAATCAAGGAGGCTGCTACCCTGTACCGGCTTATCAAAC
ACTTGGAAACTGGGGAAAGCGCTCTGTCGTCCAACTCCCTAGCTAAGGCA
AGCTTTCTAGACCAT
BO19657.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:16:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Not11-RC | 684 | CG13567-PC | 1..681 | 17..697 | 3405 | 100 | Plus |
| Not11-RB | 684 | CG13567-PB | 1..681 | 17..697 | 3405 | 100 | Plus |
| Not11-RA | 744 | CG13567-PA | 1..553 | 17..569 | 2765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:16:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Not11-RC | 1022 | CG13567-RC | 275..956 | 16..697 | 3410 | 100 | Plus |
| Not11-RB | 815 | CG13567-RB | 68..749 | 16..697 | 3410 | 100 | Plus |
| Not11-RA | 875 | CG13567-RA | 68..621 | 16..569 | 2770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:16:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24037395..24037641 | 262..16 | 1235 | 100 | Minus |
| 2R | 25286936 | 2R | 24036974..24037141 | 569..402 | 840 | 100 | Minus |
| 2R | 25286936 | 2R | 24037201..24037342 | 402..261 | 710 | 100 | Minus |
| 2R | 25286936 | 2R | 24036786..24036915 | 697..568 | 650 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:16:12 has no hits.
BO19657.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:41:00 Download gff for
BO19657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13567-RB | 166..840 | 23..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:08 Download gff for
BO19657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13567-RB | 75..749 | 23..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:14:49 Download gff for
BO19657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Not11-RB | 75..749 | 23..699 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:14:49 Download gff for
BO19657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24036975..24037140 | 403..568 | 100 | <- | Minus |
| 2R | 24037201..24037340 | 263..402 | 100 | <- | Minus |
| 2R | 24037395..24037634 | 23..262 | 100 | | Minus |
| 2R | 24036784..24036914 | 569..699 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:08 Download gff for
BO19657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19924307..19924437 | 569..699 | 98 | <- | Minus |
| arm_2R | 19924498..19924663 | 403..568 | 100 | <- | Minus |
| arm_2R | 19924724..19924863 | 263..402 | 100 | <- | Minus |
| arm_2R | 19924918..19925157 | 23..262 | 100 | | Minus |
BO19657.pep Sequence
Translation from 16 to 715
> BO19657.pep
MFLSIAPPLMDFEDELLWINQSNSDKVEIIYDKSNYITPNIKHLIEQAFL
QPLSLQNQHILFDDLLKQNTDIARQYGLTPDKLPLLVESNPLISIEILLR
LMTTSDITEYFNVLVNMDITLHSMEVVNRLTTSGPLPTEFIHLYISNCIS
TCETVKDKYMQSRLVRLVCVFLQSLIRNKIVNVRELFIEIEAFCVGFSKI
KEAATLYRLIKHLETGESALSSNSLAKASFLDH
BO19657.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:23:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Not11-PC | 227 | CG13567-PC | 1..227 | 1..227 | 1146 | 100 | Plus |
| Not11-PB | 227 | CG13567-PB | 1..227 | 1..227 | 1146 | 100 | Plus |
| Not11-PA | 247 | CG13567-PA | 1..247 | 1..227 | 1115 | 91.9 | Plus |
