BO19666.complete Sequence
442 bp assembled on 2009-05-13
GenBank Submission: KX799349
> BO19666.complete
GAAGTTATCAGTCGACATGTGTTGTAAGTCGTGCGAAGAACAACCAGCAT
CATGCTGCTCGACTTTCTATGCATTTTTCTGCATGGGAGCAGGATTCTTT
ATGTTTAGCTTCTCGCTGCACAATGTAATTATATCAGAAGAGTCTATTAC
CATTATGGATTGGTTTCTGCACATACATGGCACTGATTTGACGGAAAAAC
AGCTTTTGATATTGTACGCTTCGGATTTAATTTTTGCCTTTACGTATGTC
CTCGCAGGAGTTTTGCTAGCTTGGGGAATCAAAAGCAAAACAAAGGGATT
TATTAAAGCTGGAAAGATCTTAAGCTATTTCTTTCCCATATATAATATTG
TTTATGTATTTCCATTAGTTATACATATTGGCTGTGTGATAAAATTATGC
AGATATCTAAAGGAAAACTTTGATGCAAGCTTTCTAGACCAT
BO19666.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:29:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32192-RB | 411 | CG32192-PB | 1..408 | 17..424 | 2040 | 100 | Plus |
CG32192-RC | 402 | CG32192-PC | 1..399 | 17..424 | 1870 | 97.8 | Plus |
CG42393-RA | 408 | CG42393-PA | 289..402 | 308..421 | 225 | 79.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:29:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32192-RB | 992 | CG32192-RB | 104..511 | 17..424 | 2040 | 100 | Plus |
CG32192-RC | 983 | CG32192-RC | 104..502 | 17..424 | 1870 | 97.8 | Plus |
CG42393-RA | 1142 | CG42393-RA | 400..513 | 308..421 | 225 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:29:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18040420..18040689 | 17..286 | 1350 | 100 | Plus |
3L | 28110227 | 3L | 18040763..18040844 | 287..368 | 410 | 100 | Plus |
3L | 28110227 | 3L | 18040925..18040983 | 366..424 | 295 | 100 | Plus |
3L | 28110227 | 3L | 18043207..18043266 | 308..367 | 195 | 88.3 | Plus |
Blast to na_te.dros performed 2014-11-27 15:29:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsil\Loa | 7779 | Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). | 7419..7474 | 354..300 | 106 | 67.9 | Minus |
blood | 7410 | blood BLOOD 7410bp | 1858..1908 | 388..337 | 104 | 69.2 | Minus |
BO19666.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:53 Download gff for
BO19666.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32192-RB | 104..511 | 17..426 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:42:01 Download gff for
BO19666.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32192-RB | 104..511 | 17..426 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:09:13 Download gff for
BO19666.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32192-RB | 104..511 | 17..426 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:09:13 Download gff for
BO19666.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18040420..18040689 | 17..286 | 100 | -> | Plus |
3L | 18040763..18040844 | 287..368 | 100 | -> | Plus |
3L | 18040928..18040983 | 369..426 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:42:01 Download gff for
BO19666.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18033520..18033789 | 17..286 | 100 | -> | Plus |
arm_3L | 18033863..18033944 | 287..368 | 100 | -> | Plus |
arm_3L | 18034028..18034083 | 369..426 | 96 | | Plus |
BO19666.pep Sequence
Translation from 16 to 442
> BO19666.pep
MCCKSCEEQPASCCSTFYAFFCMGAGFFMFSFSLHNVIISEESITIMDWF
LHIHGTDLTEKQLLILYASDLIFAFTYVLAGVLLAWGIKSKTKGFIKAGK
ILSYFFPIYNIVYVFPLVIHIGCVIKLCRYLKENFDASFLDH
BO19666.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:22:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32192-PB | 136 | CG32192-PB | 1..136 | 1..136 | 732 | 100 | Plus |
CG32192-PC | 133 | CG32192-PC | 1..133 | 1..136 | 703 | 97.8 | Plus |
CG42393-PA | 135 | CG42393-PA | 2..135 | 3..136 | 472 | 61.2 | Plus |