BO19670.complete Sequence
1576 bp assembled on 2009-05-13
GenBank Submission: KX798280
> BO19670.complete
GAAGTTATCAGTCGACATGGCCAACACTATTTCGTTAATGTCCAACGTGA
TACGCAATGTAGTGAGTAAAAAACGTATACGATACAAAGAAAAAGGATAC
GATTTGGATTTAACATACATTAATGATAACATAATTGCCATGGGCTATCC
AGCACCGGATAAACTAGAGGGCCTATTCAGAAACCGTCTGGAAGATGTCT
TTAAGCTATTGGAAGAGAATCATGCCCAGCATTACAAAATCTATAACCTA
TGCTCGGAGCGTAGTTACGACGTTGCTAAATTTCGCGGGAGAGTAGCTGT
TTATCCGTTCGATGATCATAACCCTCCAACGATTGAGTTAATACAACGAT
TTTGCAGTGATGTTGATATGTGGCTCAAGGAAGATTCGTCCAATGTTGTA
GCCGTGCACTGTAAAGCTGGAAAGGGCAGAACCGGTACCATGATCTGCGC
ATATTTAGTGTTCAGTGGAATTAAAAAATCCGCCGACGAGGCATTAGCGT
GGTATGATGAGAAGCGTACAAAGGACCGAAAAGGTGTGACAATCCCATCT
CAGCGTCGATATGTTCAGTATTTTTCCAAACTAGTTTGTTCAAGTGTTCC
ATATTCGAAAGTAAGCCTTAACGTATGTGAAATACGCTTCTCGGAGTCCA
GTTGTGTGCAAAACTTAGGCATGGTAGAATGTTCAATATCTGTATTACAC
GACTCAGCCACAGAAAATGCAAAGCCAGATAGACTGAAAACCTTGCCGAT
TGATTTTCAAAAATCATTTGTTTTGACCATTAAACCATCAATACCAGTTT
CCGGCGATGTAAAATTTGAACTCACAAAAAAATCCCCAGATAAAATCATT
TGTCACTTTTGGCTAAATACGTTTTTTGTACGAAACTATTCACCTTGCGA
GTCCGATGGAACAGTTAACAAATATATACACACTTTAAGCAAATCAGAAA
TCGATGATGTACATAAAGACAGTGAACATAAAAGATTTTCAGAAGAATTC
AAGATTTCAATCGTTTTTGAGGCAGAGAATTTTAGCAATGATGTTCAAGC
TGAAGCGTCCGAAAAAGAGAGAAACGAAAATGTTTTAAATTTCGAAAGAT
CAGACTATGACAGTTTGTCTCCAAACTGCTATGCCGAAAAAAAAGTCTTA
ACTGCGATCGTCAATGATAATACAACGAAAAGTCAAACAATAGAAACGTT
GGATCATAAGGATATAGTTACTAAAATTCAATACGACACATCAACCAATT
CAAAAAATACTTCGACTGCGTGCAAACGCAAACAGCCTAATAGCAAAACT
CTTTTACCAAGCTTGAATGATTCCACAAAAGAGGAAATAAAACGAAATCA
TATATTTAATCAACCGTCCATTAAGAAAACTGATTTAATCAAATGGCAGA
ATAGTGAAGTTCATATCACCTCTGACACTCGAAGTATAAACGAAAATAAG
AACATCAATTACAATTCATACATCACATGTAAACAATCCTCTCCAAAATT
CAACTGTGGTACCGAAGATGGCGAGGAAGATTGGGAATCCGGTGAATCAA
CATACCTGGCAAGCTTTCTAGACCAT
BO19670.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:54:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pten-RH | 1545 | CG5671-PH | 1..1542 | 17..1558 | 7710 | 100 | Plus |
| Pten-RG | 1545 | CG5671-PG | 1..1542 | 17..1558 | 7710 | 100 | Plus |
| Pten-RB | 1545 | CG5671-PB | 1..1542 | 17..1558 | 7710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:54:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pten-RH | 2467 | CG5671-RH | 755..2296 | 17..1558 | 7710 | 100 | Plus |
| Pten-RG | 2617 | CG5671-RG | 912..2453 | 17..1558 | 7710 | 100 | Plus |
| Pten-RB | 2355 | CG5671-RB | 643..2184 | 17..1558 | 7710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:54:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10257391..10257716 | 1545..1220 | 1630 | 100 | Minus |
| 2L | 23513712 | 2L | 10257778..10257995 | 1219..1002 | 1090 | 100 | Minus |
| 2L | 23513712 | 2L | 10258726..10258916 | 624..434 | 955 | 100 | Minus |
| 2L | 23513712 | 2L | 10259241..10259417 | 289..113 | 870 | 99.4 | Minus |
| 2L | 23513712 | 2L | 10258235..10258397 | 893..731 | 815 | 100 | Minus |
| 2L | 23513712 | 2L | 10259026..10259174 | 437..289 | 745 | 100 | Minus |
| 2L | 23513712 | 2L | 10258064..10258173 | 1003..894 | 550 | 100 | Minus |
| 2L | 23513712 | 2L | 10258549..10258656 | 730..623 | 540 | 100 | Minus |
| 2L | 23513712 | 2L | 10259476..10259575 | 116..17 | 500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:54:24 has no hits.
BO19670.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:58 Download gff for
BO19670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pten-RB | 611..2152 | 17..1560 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:28:14 Download gff for
BO19670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pten-RB | 643..2184 | 17..1560 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:58:45 Download gff for
BO19670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pten-RB | 643..2184 | 17..1560 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:58:45 Download gff for
BO19670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10258235..10258397 | 731..893 | 100 | <- | Minus |
| 2L | 10258549..10258656 | 623..730 | 100 | <- | Minus |
| 2L | 10258728..10258915 | 435..622 | 100 | <- | Minus |
| 2L | 10259029..10259173 | 290..434 | 100 | <- | Minus |
| 2L | 10259241..10259413 | 117..289 | 100 | <- | Minus |
| 2L | 10259476..10259575 | 17..116 | 100 | | Minus |
| 2L | 10257395..10257716 | 1220..1541 | 100 | <- | Minus |
| 2L | 10257778..10257993 | 1004..1219 | 100 | <- | Minus |
| 2L | 10258064..10258173 | 894..1003 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:28:14 Download gff for
BO19670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10259241..10259413 | 117..289 | 100 | <- | Minus |
| arm_2L | 10259476..10259575 | 17..116 | 100 | | Minus |
| arm_2L | 10258235..10258397 | 731..893 | 100 | <- | Minus |
| arm_2L | 10258549..10258656 | 623..730 | 100 | <- | Minus |
| arm_2L | 10257395..10257716 | 1220..1541 | 100 | <- | Minus |
| arm_2L | 10257778..10257993 | 1004..1219 | 100 | <- | Minus |
| arm_2L | 10258728..10258915 | 435..622 | 100 | <- | Minus |
| arm_2L | 10259029..10259173 | 290..434 | 100 | <- | Minus |
| arm_2L | 10258064..10258173 | 894..1003 | 100 | <- | Minus |
BO19670.pep Sequence
Translation from 16 to 1576
> BO19670.pep
MANTISLMSNVIRNVVSKKRIRYKEKGYDLDLTYINDNIIAMGYPAPDKL
EGLFRNRLEDVFKLLEENHAQHYKIYNLCSERSYDVAKFRGRVAVYPFDD
HNPPTIELIQRFCSDVDMWLKEDSSNVVAVHCKAGKGRTGTMICAYLVFS
GIKKSADEALAWYDEKRTKDRKGVTIPSQRRYVQYFSKLVCSSVPYSKVS
LNVCEIRFSESSCVQNLGMVECSISVLHDSATENAKPDRLKTLPIDFQKS
FVLTIKPSIPVSGDVKFELTKKSPDKIICHFWLNTFFVRNYSPCESDGTV
NKYIHTLSKSEIDDVHKDSEHKRFSEEFKISIVFEAENFSNDVQAEASEK
ERNENVLNFERSDYDSLSPNCYAEKKVLTAIVNDNTTKSQTIETLDHKDI
VTKIQYDTSTNSKNTSTACKRKQPNSKTLLPSLNDSTKEEIKRNHIFNQP
SIKKTDLIKWQNSEVHITSDTRSINENKNINYNSYITCKQSSPKFNCGTE
DGEEDWESGESTYLASFLDH
BO19670.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:23:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pten-PH | 514 | CG5671-PH | 1..514 | 1..514 | 2703 | 100 | Plus |
| Pten-PG | 514 | CG5671-PG | 1..514 | 1..514 | 2703 | 100 | Plus |
| Pten-PB | 514 | CG5671-PB | 1..514 | 1..514 | 2703 | 100 | Plus |
| Pten-PD | 514 | CG5671-PD | 1..514 | 1..514 | 2703 | 100 | Plus |
| Pten-PA | 509 | CG5671-PA | 1..508 | 1..508 | 2672 | 100 | Plus |
