BO19673.complete Sequence
787 bp assembled on 2009-05-13
GenBank Submission: KX799270
> BO19673.complete
GAAGTTATCAGTCGACATGGCCCTGCCGCAAAAGCACTTCAAGAGGGGTT
CCACCAAGCCCGAGCTGCCAGAAGATGGAGTTCCTCGTTTCTTTTCCATG
GCATTCTGCCCCTTCAGCCACCGAGTTCGTCTGATGCTGGCCGCCAAACA
TATTGAACATCATAAGATCTACGTCGATTTGATTGAGAAGCCTGAATGGT
ACAAGGATTTCAGTCCTCTGGGCAAAGTGCCAGCCCTGCAGCTTACTGGG
GTGAAGGACCAACCGACCCTCGTGGAGTCGCTCATCATAGCAGAGTACTT
GGACCAGCAATATCCCCAGACGCGACTCTTTCCCACGGATCCGCTTCAGA
AGGCGCTGGACAAGATTCTAATCGAACGTTTTGCTCCAGTGGTCAGTGCC
ATTTATCCTGTGCTGACTTGTAATCCCAACGCTCCGAAAGATGCCATACC
GAACTTCGAGAATGCCTTGGATGTTTTTGAAGTGGAGTTGGGCAAAAGAG
GAACGCCCTACTTTGCCGGCCAGCACATTGGAATCGTGGACTACATGATT
TGGCCTTGGTTCGAACGTTTTCCCAGCATGAAGATCAATACGGAGCAAAA
GTATGAGCTGGATACAAAACGATTTGAGAAGCTGCTCAAGTGGCGCGATT
TGATGACCCAGGATGAGGTTGTGCAGAAGACAGCTTTGGATGTCCAGTTG
CATGCTGAGTTCCAGAAATCGAAGACCCTTGGAAATCCCCAGTACGACAT
TGCCTTCAAGGGTACACCAGCAAGCTTTCTAGACCAT
BO19673.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:01:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstO2-RA | 756 | CG6673-PA | 1..753 | 17..769 | 3765 | 100 | Plus |
GstO2-RB | 753 | CG6673-PB | 1..215 | 17..231 | 265 | 74.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:01:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstO2-RA | 932 | CG6673-RA | 71..823 | 17..769 | 3765 | 100 | Plus |
GstO2-RB | 912 | CG6673-RB | 71..285 | 17..231 | 265 | 74.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:01:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8521732..8522319 | 634..47 | 2940 | 100 | Minus |
3L | 28110227 | 3L | 8521538..8521673 | 769..634 | 680 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:01:49 has no hits.
BO19673.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:50 Download gff for
BO19673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6673-RA | 70..822 | 17..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:36:15 Download gff for
BO19673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstO2-RA | 71..823 | 17..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:58:16 Download gff for
BO19673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstO2-RA | 71..823 | 17..771 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:58:16 Download gff for
BO19673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8521536..8521672 | 635..771 | 98 | <- | Minus |
3L | 8521732..8522318 | 48..634 | 100 | <- | Minus |
3L | 8523401..8523431 | 17..47 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:36:15 Download gff for
BO19673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8514636..8514772 | 635..771 | 98 | <- | Minus |
arm_3L | 8514832..8515418 | 48..634 | 100 | <- | Minus |
arm_3L | 8516501..8516531 | 17..47 | 100 | | Minus |
BO19673.pep Sequence
Translation from 16 to 787
> BO19673.pep
MALPQKHFKRGSTKPELPEDGVPRFFSMAFCPFSHRVRLMLAAKHIEHHK
IYVDLIEKPEWYKDFSPLGKVPALQLTGVKDQPTLVESLIIAEYLDQQYP
QTRLFPTDPLQKALDKILIERFAPVVSAIYPVLTCNPNAPKDAIPNFENA
LDVFEVELGKRGTPYFAGQHIGIVDYMIWPWFERFPSMKINTEQKYELDT
KRFEKLLKWRDLMTQDEVVQKTALDVQLHAEFQKSKTLGNPQYDIAFKGT
PASFLDH
BO19673.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:22:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstO2-PA | 251 | CG6673-PA | 1..251 | 1..251 | 1339 | 100 | Plus |
GstO2-PB | 250 | CG6673-PB | 1..248 | 1..248 | 890 | 66.3 | Plus |
GstO3-PA | 241 | CG6776-PA | 5..239 | 6..245 | 624 | 48.3 | Plus |
se-PA | 243 | CG6781-PA | 5..241 | 6..248 | 575 | 43.6 | Plus |
GstO1-PA | 254 | CG6662-PA | 5..245 | 6..247 | 572 | 45.9 | Plus |