BO19678.complete Sequence
760 bp assembled on 2009-05-13
GenBank Submission: KX799062
> BO19678.complete
GAAGTTATCAGTCGACATGCTAAAGGGTAGCACACTGAAAGCCCTGGACG
TCAGAATCCTATGGCCCCTTATTGAAACAAGGTCAGCAGGTAAATGTAAA
TTACATAACCCGAGGCCGACTCCAAACCGTAACATTGCGGCAGCAAAATT
GATCGTGACACTCAGATTGCTCTTATCCTGTTGCAGTGGAGGACACCAGC
GCAGCTTCTCCAGCAGCACCCACCGGTCCTACATAACATTCAATGATTTC
CGCAAAAAACACCGCTGGTACACAAAAAAGGAGCTTGTGGGCTACTCCAT
GCAGGACATGTACAGCGTGGTTTCCGACGTCAGCAATTACCACAAGTTCG
TGCCGTATGTGAAGCGCTCCGATGTGCACAGCCGGGGAAGTGAGGGCTTC
AAGGCGGACCTCATTGTTGGCTTTCCGCCGCTTAACGAGGCCTACACCTC
GCAGGTGACCCTGGTGCCGCCCAGCTTGGTTAAGTCAGAGTGCCACGATG
GACGTCTGTTCAACTACCTCCTGAATGAGTGGTCTTTTAAGCCGGGCCTC
AAGGACATACCTAACTCCTGCGTGCTGGACTTCAAGGTATCGTTCGAGTT
CAAGTCCCTCCTGCACAGCAACGTCGCCAACATATTTTTTGACCTTATCT
GCGATCAAATGGAAAACGCTTTTATCCAGGAGGTCCGTCGACGGAGTGGT
CCGCCCTCAATCCGCTCCCACGTGCTTACTTCGGATCGGTCCGCAAGCTT
TCTAGACCAT
BO19678.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:42:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9410-RB | 729 | CG9410-PB | 1..726 | 17..742 | 3630 | 100 | Plus |
CG9410-RA | 624 | CG9410-PA | 64..621 | 185..742 | 2790 | 100 | Plus |
CG9410-RE | 123 | CG9410-PE | 1..73 | 17..89 | 365 | 100 | Plus |
CG9410-RA | 624 | CG9410-PA | 1..65 | 17..81 | 325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:42:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9410-RB | 930 | CG9410-RB | 71..796 | 17..742 | 3630 | 100 | Plus |
CG9410-RE | 833 | CG9410-RE | 140..699 | 183..742 | 2800 | 100 | Plus |
CG9410-RA | 891 | CG9410-RA | 200..757 | 185..742 | 2790 | 100 | Plus |
CG9410-RE | 833 | CG9410-RE | 71..143 | 17..89 | 365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:42:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6669491..6669942 | 291..742 | 2260 | 100 | Plus |
2R | 25286936 | 2R | 6669160..6669434 | 17..291 | 1375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:42:34 has no hits.
BO19678.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:41:23 Download gff for
BO19678.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9410-RD | 583..1308 | 17..744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:13 Download gff for
BO19678.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9410-RB | 71..796 | 17..744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:46 Download gff for
BO19678.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9410-RB | 71..796 | 17..744 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:46 Download gff for
BO19678.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6669160..6669434 | 17..291 | 100 | -> | Plus |
2R | 6669492..6669942 | 292..744 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:13 Download gff for
BO19678.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2556665..2556939 | 17..291 | 100 | -> | Plus |
arm_2R | 2556997..2557447 | 292..744 | 99 | | Plus |
BO19678.pep Sequence
Translation from 16 to 760
> BO19678.pep
MLKGSTLKALDVRILWPLIETRSAGKCKLHNPRPTPNRNIAAAKLIVTLR
LLLSCCSGGHQRSFSSSTHRSYITFNDFRKKHRWYTKKELVGYSMQDMYS
VVSDVSNYHKFVPYVKRSDVHSRGSEGFKADLIVGFPPLNEAYTSQVTLV
PPSLVKSECHDGRLFNYLLNEWSFKPGLKDIPNSCVLDFKVSFEFKSLLH
SNVANIFFDLICDQMENAFIQEVRRRSGPPSIRSHVLTSDRSASFLDH
BO19678.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:22:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9410-PB | 242 | CG9410-PB | 1..242 | 1..242 | 1278 | 100 | Plus |
CG9410-PA | 207 | CG9410-PA | 1..207 | 1..242 | 1047 | 85.5 | Plus |