BO19679.complete Sequence
490 bp assembled on 2009-05-13
GenBank Submission: KX793999
> BO19679.complete
GAAGTTATCAGTCGACATGTCGCTCGTCATCCCAGAGAAGTTCCAGCACA
TCCTGCGTATCATGAATACGAACATCGACGGCAAGCGCAAGGTTGGCATC
GCCATGACCGCCATCAAGGGAGTGGGTCGCCGCTACTCCAACATTGTGCT
GAAGAAGGCCGATGTCGATCTTACCAAGCGCGCCGGTGAGTGCACCGAGG
AGGAGGTCGACAAGGTGGTGACCATCATCTCGAACCCTCTGCAGTACAAG
GTGCCCAACTGGTTCCTCAACAGGCAGAAGGACATCATCGATGGCAAGTA
CTGGCAGCTGACCTCCTCCAACTTGGACTCGAAGCTGCGTGACGATCTGG
AGCGTCTGAAGAAGATCCGCTCCCACCGTGGTCTGCGTCACTACTGGGGC
CTCCGTGTGCGTGGCCAGCACACCAAGACCACCGGTCGTCGTGGTCGCAC
CGTGGGTGTGTCCAAGAAGAAGGCAAGCTTTCTAGACCAT
BO19679.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:38:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS18-RA | 459 | CG8900-PA | 1..456 | 17..472 | 2280 | 100 | Plus |
| RpS18-RB | 459 | CG8900-PB | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:38:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS18-RA | 583 | CG8900-RA | 39..494 | 17..472 | 2280 | 100 | Plus |
| RpS18-RB | 606 | CG8900-RB | 62..517 | 17..472 | 2280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:38:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20264491..20264759 | 204..472 | 1345 | 100 | Plus |
| 2R | 25286936 | 2R | 20264246..20264434 | 19..207 | 945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:38:38 has no hits.
BO19679.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:41:22 Download gff for
BO19679.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS18-RB | 58..513 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:01:40 Download gff for
BO19679.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS18-RB | 62..517 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:05:29 Download gff for
BO19679.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS18-RB | 62..517 | 17..474 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:05:29 Download gff for
BO19679.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20264245..20264432 | 17..205 | 99 | -> | Plus |
| 2R | 20264493..20264759 | 206..474 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:01:40 Download gff for
BO19679.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16151750..16151937 | 17..205 | 99 | -> | Plus |
| arm_2R | 16151998..16152264 | 206..474 | 99 | | Plus |
BO19679.pep Sequence
Translation from 16 to 490
> BO19679.pep
MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADV
DLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTS
SNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSK
KKASFLDH
BO19679.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:22:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS18-PA | 152 | CG8900-PA | 1..152 | 1..152 | 789 | 100 | Plus |
| RpS18-PB | 152 | CG8900-PB | 1..152 | 1..152 | 789 | 100 | Plus |
